基于特征的仿射配准方法捕捉背景肺组织变形用于磨砂玻璃结节跟踪。

IF 1.3 Q4 ENGINEERING, BIOMEDICAL
Yehuda K Ben-Zikri, María Helguera, David Fetzer, David A Shrier, Stephen R Aylward, Deepak Chittajallu, Marc Niethammer, Nathan D Cahill, Cristian A Linte
{"title":"基于特征的仿射配准方法捕捉背景肺组织变形用于磨砂玻璃结节跟踪。","authors":"Yehuda K Ben-Zikri,&nbsp;María Helguera,&nbsp;David Fetzer,&nbsp;David A Shrier,&nbsp;Stephen R Aylward,&nbsp;Deepak Chittajallu,&nbsp;Marc Niethammer,&nbsp;Nathan D Cahill,&nbsp;Cristian A Linte","doi":"10.1080/21681163.2021.1994471","DOIUrl":null,"url":null,"abstract":"<p><p>Lung nodule tracking assessment relies on cross-sectional measurements of the largest lesion profile depicted in initial and follow-up computed tomography (CT) images. However, apparent changes in nodule size assessed via simple image-based measurements may also be compromised by the effect of the background lung tissue deformation on the GGN between the initial and follow-up images, leading to erroneous conclusions about nodule changes due to disease. To compensate for the lung deformation and enable consistent nodule tracking, here we propose a feature-based affine registration method and study its performance vis-a-vis several other registration methods. We implement and test each registration method using both a lung- and a lesion-centered region of interest on ten patient CT datasets featuring twelve nodules, including both benign and malignant GGO lesions containing pure GGNs, part-solid, or solid nodules. We evaluate each registration method according to the target registration error (TRE) computed across 30 - 50 homologous fiducial landmarks surrounding the lesions and selected by expert radiologists in both the initial and follow-up patient CT images. Our results show that the proposed feature-based affine lesion-centered registration yielded a 1.1 ± 1.2 mm TRE, while a Symmetric Normalization deformable registration yielded a 1.2 ± 1.2 mm TRE, and a least-square fit registration of the 30-50 validation fiducial landmark set yielded a 1.5 ± 1.2 mm TRE. Although the deformable registration yielded a slightly higher registration accuracy than the feature-based affine registration, it is significantly more computationally efficient, eliminates the need for ambiguous segmentation of GGNs featuring ill-defined borders, and reduces the susceptibility of artificial deformations introduced by the deformable registration, which may lead to increased similarity between the registered initial and follow-up images, over-compensating for the background lung tissue deformation, and, in turn, compromising the true disease-induced nodule change assessment. We also assessed the registration qualitatively, by visual inspection of the subtraction images, and conducted a pilot pre-clinical study that showed the proposed feature-based lesion-centered affine registration effectively compensates for the background lung tissue deformation between the initial and follow-up images and also serves as a reliable baseline registration method prior to assessing lung nodule changes due to disease.</p>","PeriodicalId":51800,"journal":{"name":"Computer Methods in Biomechanics and Biomedical Engineering-Imaging and Visualization","volume":null,"pages":null},"PeriodicalIF":1.3000,"publicationDate":"2022-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9718421/pdf/nihms-1751692.pdf","citationCount":"1","resultStr":"{\"title\":\"A Feature-based Affine Registration Method for Capturing Background Lung Tissue Deformation for Ground Glass Nodule Tracking.\",\"authors\":\"Yehuda K Ben-Zikri,&nbsp;María Helguera,&nbsp;David Fetzer,&nbsp;David A Shrier,&nbsp;Stephen R Aylward,&nbsp;Deepak Chittajallu,&nbsp;Marc Niethammer,&nbsp;Nathan D Cahill,&nbsp;Cristian A Linte\",\"doi\":\"10.1080/21681163.2021.1994471\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Lung nodule tracking assessment relies on cross-sectional measurements of the largest lesion profile depicted in initial and follow-up computed tomography (CT) images. However, apparent changes in nodule size assessed via simple image-based measurements may also be compromised by the effect of the background lung tissue deformation on the GGN between the initial and follow-up images, leading to erroneous conclusions about nodule changes due to disease. To compensate for the lung deformation and enable consistent nodule tracking, here we propose a feature-based affine registration method and study its performance vis-a-vis several other registration methods. We implement and test each registration method using both a lung- and a lesion-centered region of interest on ten patient CT datasets featuring twelve nodules, including both benign and malignant GGO lesions containing pure GGNs, part-solid, or solid nodules. We evaluate each registration method according to the target registration error (TRE) computed across 30 - 50 homologous fiducial landmarks surrounding the lesions and selected by expert radiologists in both the initial and follow-up patient CT images. Our results show that the proposed feature-based affine lesion-centered registration yielded a 1.1 ± 1.2 mm TRE, while a Symmetric Normalization deformable registration yielded a 1.2 ± 1.2 mm TRE, and a least-square fit registration of the 30-50 validation fiducial landmark set yielded a 1.5 ± 1.2 mm TRE. Although the deformable registration yielded a slightly higher registration accuracy than the feature-based affine registration, it is significantly more computationally efficient, eliminates the need for ambiguous segmentation of GGNs featuring ill-defined borders, and reduces the susceptibility of artificial deformations introduced by the deformable registration, which may lead to increased similarity between the registered initial and follow-up images, over-compensating for the background lung tissue deformation, and, in turn, compromising the true disease-induced nodule change assessment. We also assessed the registration qualitatively, by visual inspection of the subtraction images, and conducted a pilot pre-clinical study that showed the proposed feature-based lesion-centered affine registration effectively compensates for the background lung tissue deformation between the initial and follow-up images and also serves as a reliable baseline registration method prior to assessing lung nodule changes due to disease.</p>\",\"PeriodicalId\":51800,\"journal\":{\"name\":\"Computer Methods in Biomechanics and Biomedical Engineering-Imaging and Visualization\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":1.3000,\"publicationDate\":\"2022-01-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9718421/pdf/nihms-1751692.pdf\",\"citationCount\":\"1\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Computer Methods in Biomechanics and Biomedical Engineering-Imaging and Visualization\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1080/21681163.2021.1994471\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q4\",\"JCRName\":\"ENGINEERING, BIOMEDICAL\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Computer Methods in Biomechanics and Biomedical Engineering-Imaging and Visualization","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1080/21681163.2021.1994471","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"ENGINEERING, BIOMEDICAL","Score":null,"Total":0}
引用次数: 1

摘要

肺结节跟踪评估依赖于初始和随访计算机断层扫描(CT)图像中描述的最大病变剖面的横断面测量。然而,通过简单的基于图像的测量评估的结节大小的明显变化也可能受到初始和随访图像之间背景肺组织变形对GGN的影响的影响,从而导致关于疾病引起的结节变化的错误结论。为了补偿肺变形并实现一致的结节跟踪,本文提出了一种基于特征的仿射配准方法,并对比研究了其与其他几种配准方法的性能。我们使用10个患者CT数据集上的肺中心和病灶中心区域来实现和测试每种注册方法,这些数据集包含12个结节,包括含有纯ggn、部分实性或实性结节的良性和恶性GGO病变。我们根据目标配准误差(TRE)评估每种配准方法,目标配准误差是在病变周围30 - 50个同源基准点上计算出来的,并由放射科专家在初始和随访患者CT图像中选择。我们的研究结果表明,提出的基于特征的仿射病灶中心配准产生1.1±1.2 mm的TRE,而对称归一化可变形配准产生1.2±1.2 mm的TRE,而30-50验证基准地标集的最小二乘配准产生1.5±1.2 mm的TRE。虽然可变形配准的配准精度略高于基于特征的仿射配准,但它的计算效率显著提高,消除了对边界不明确的ggn进行模糊分割的需要,并降低了可变形配准引入的人工变形的敏感性,这可能导致注册的初始图像和后续图像之间的相似性增加。过度补偿了背景肺组织变形,进而损害了真正的疾病引起的结节变化评估。我们还通过视觉检查减影图像对配准进行了定性评估,并进行了临床前试验研究,结果表明所提出的基于特征的以病灶为中心的仿射配准有效地补偿了初始和随访图像之间的背景肺组织变形,并且可以作为评估肺结节病变之前的可靠基线配准方法。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

A Feature-based Affine Registration Method for Capturing Background Lung Tissue Deformation for Ground Glass Nodule Tracking.

A Feature-based Affine Registration Method for Capturing Background Lung Tissue Deformation for Ground Glass Nodule Tracking.

A Feature-based Affine Registration Method for Capturing Background Lung Tissue Deformation for Ground Glass Nodule Tracking.

Lung nodule tracking assessment relies on cross-sectional measurements of the largest lesion profile depicted in initial and follow-up computed tomography (CT) images. However, apparent changes in nodule size assessed via simple image-based measurements may also be compromised by the effect of the background lung tissue deformation on the GGN between the initial and follow-up images, leading to erroneous conclusions about nodule changes due to disease. To compensate for the lung deformation and enable consistent nodule tracking, here we propose a feature-based affine registration method and study its performance vis-a-vis several other registration methods. We implement and test each registration method using both a lung- and a lesion-centered region of interest on ten patient CT datasets featuring twelve nodules, including both benign and malignant GGO lesions containing pure GGNs, part-solid, or solid nodules. We evaluate each registration method according to the target registration error (TRE) computed across 30 - 50 homologous fiducial landmarks surrounding the lesions and selected by expert radiologists in both the initial and follow-up patient CT images. Our results show that the proposed feature-based affine lesion-centered registration yielded a 1.1 ± 1.2 mm TRE, while a Symmetric Normalization deformable registration yielded a 1.2 ± 1.2 mm TRE, and a least-square fit registration of the 30-50 validation fiducial landmark set yielded a 1.5 ± 1.2 mm TRE. Although the deformable registration yielded a slightly higher registration accuracy than the feature-based affine registration, it is significantly more computationally efficient, eliminates the need for ambiguous segmentation of GGNs featuring ill-defined borders, and reduces the susceptibility of artificial deformations introduced by the deformable registration, which may lead to increased similarity between the registered initial and follow-up images, over-compensating for the background lung tissue deformation, and, in turn, compromising the true disease-induced nodule change assessment. We also assessed the registration qualitatively, by visual inspection of the subtraction images, and conducted a pilot pre-clinical study that showed the proposed feature-based lesion-centered affine registration effectively compensates for the background lung tissue deformation between the initial and follow-up images and also serves as a reliable baseline registration method prior to assessing lung nodule changes due to disease.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
CiteScore
2.80
自引率
6.20%
发文量
102
期刊介绍: Computer Methods in Biomechanics and Biomedical Engineering: Imaging & Visualization is an international journal whose main goals are to promote solutions of excellence for both imaging and visualization of biomedical data, and establish links among researchers, clinicians, the medical technology sector and end-users. The journal provides a comprehensive forum for discussion of the current state-of-the-art in the scientific fields related to imaging and visualization, including, but not limited to: Applications of Imaging and Visualization Computational Bio- imaging and Visualization Computer Aided Diagnosis, Surgery, Therapy and Treatment Data Processing and Analysis Devices for Imaging and Visualization Grid and High Performance Computing for Imaging and Visualization Human Perception in Imaging and Visualization Image Processing and Analysis Image-based Geometric Modelling Imaging and Visualization in Biomechanics Imaging and Visualization in Biomedical Engineering Medical Clinics Medical Imaging and Visualization Multi-modal Imaging and Visualization Multiscale Imaging and Visualization Scientific Visualization Software Development for Imaging and Visualization Telemedicine Systems and Applications Virtual Reality Visual Data Mining and Knowledge Discovery.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信