PBX1/miR-141-miR-200a/EGR2/SOCS3轴;综合分析相互作用网络发现MiR-141和mir -200a介导的Th17细胞分化的可能机制

IF 1.6 4区 生物学 Q4 BIOTECHNOLOGY & APPLIED MICROBIOLOGY
Leila Bahmani, Masoud Baghi, Maryam Peymani, Arash Javeri, Kamran Ghaedi
{"title":"PBX1/miR-141-miR-200a/EGR2/SOCS3轴;综合分析相互作用网络发现MiR-141和mir -200a介导的Th17细胞分化的可能机制","authors":"Leila Bahmani,&nbsp;Masoud Baghi,&nbsp;Maryam Peymani,&nbsp;Arash Javeri,&nbsp;Kamran Ghaedi","doi":"10.30498/ijb.2022.317078.3211","DOIUrl":null,"url":null,"abstract":"<p><strong>Background: </strong>Overexpression of miR-141 and miR-200a is known to be associated with the differentiation of T helper 17 (Th17) cells, which are key players in the pathophysiology of autoimmune disorders. However, the function and governing mechanism of these two microRNAs (miRNAs) in Th17 cell skewing are poorly defined.</p><p><strong>Objectives: </strong>The aim of the present study was to identify the common upstream transcription factors and downstream target genes of miR-141 and miR-200a to obtain a better insight into the possible dysregulated molecular regulatory networks driving miR-141/miR-200a-mediated Th17 cell development.</p><p><strong>Materials and methods: </strong>A consensus-based prediction strategy was applied for <i>in-silico</i> identification of potential transcription factors and putative gene targets of miR-141 and miR-200a. Thereafter, we analyzed the expression patterns of candidate transcription factors and target genes during human Th17 cell differentiation by quantitative real-time PCR and examined the direct interaction between both miRNAs and their potential target sequences using dual-luciferase reporter assays.</p><p><strong>Results: </strong>According to our miRNA-based and gene-based interaction network analyses, <i>pre-B cell leukemia homeobox</i> (<i>PBX1</i>) and <i>early growth response 2</i> (<i>EGR2</i>) were respectively taken into account as the potential upstream transcription factor and downstream target gene of miR-141 and miR-200a. There was a significant overexpression of the <i>PBX1</i> gene during the Th17 cell induction period. Furthermore, both miRNAs could directly target <i>EGR2</i> and inhibit its expression. As a downstream gene of <i>EGR2</i>, the <i>suppressor of cytokine signaling 3</i> (<i>SOCS3</i>) was also downregulated during the differentiation process.</p><p><strong>Conclusions: </strong>These results indicate that activation of the PBX1/miR-141-miR-200a/EGR2/SOCS3 axis may promote Th17 cell development and, therefore, trigger or exacerbate Th17-mediated autoimmunity.</p>","PeriodicalId":14492,"journal":{"name":"Iranian Journal of Biotechnology","volume":null,"pages":null},"PeriodicalIF":1.6000,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://ftp.ncbi.nlm.nih.gov/pub/pmc/oa_pdf/a5/72/IJB-21-e3211.PMC9938929.pdf","citationCount":"0","resultStr":"{\"title\":\"The PBX1/miR-141-miR-200a/EGR2/SOCS3 Axis; Integrative Analysis of Interaction Networks to Discover the Possible Mechanism of MiR-141 and MiR-200a-Mediated Th17 Cell Differentiation.\",\"authors\":\"Leila Bahmani,&nbsp;Masoud Baghi,&nbsp;Maryam Peymani,&nbsp;Arash Javeri,&nbsp;Kamran Ghaedi\",\"doi\":\"10.30498/ijb.2022.317078.3211\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><strong>Background: </strong>Overexpression of miR-141 and miR-200a is known to be associated with the differentiation of T helper 17 (Th17) cells, which are key players in the pathophysiology of autoimmune disorders. However, the function and governing mechanism of these two microRNAs (miRNAs) in Th17 cell skewing are poorly defined.</p><p><strong>Objectives: </strong>The aim of the present study was to identify the common upstream transcription factors and downstream target genes of miR-141 and miR-200a to obtain a better insight into the possible dysregulated molecular regulatory networks driving miR-141/miR-200a-mediated Th17 cell development.</p><p><strong>Materials and methods: </strong>A consensus-based prediction strategy was applied for <i>in-silico</i> identification of potential transcription factors and putative gene targets of miR-141 and miR-200a. Thereafter, we analyzed the expression patterns of candidate transcription factors and target genes during human Th17 cell differentiation by quantitative real-time PCR and examined the direct interaction between both miRNAs and their potential target sequences using dual-luciferase reporter assays.</p><p><strong>Results: </strong>According to our miRNA-based and gene-based interaction network analyses, <i>pre-B cell leukemia homeobox</i> (<i>PBX1</i>) and <i>early growth response 2</i> (<i>EGR2</i>) were respectively taken into account as the potential upstream transcription factor and downstream target gene of miR-141 and miR-200a. There was a significant overexpression of the <i>PBX1</i> gene during the Th17 cell induction period. Furthermore, both miRNAs could directly target <i>EGR2</i> and inhibit its expression. As a downstream gene of <i>EGR2</i>, the <i>suppressor of cytokine signaling 3</i> (<i>SOCS3</i>) was also downregulated during the differentiation process.</p><p><strong>Conclusions: </strong>These results indicate that activation of the PBX1/miR-141-miR-200a/EGR2/SOCS3 axis may promote Th17 cell development and, therefore, trigger or exacerbate Th17-mediated autoimmunity.</p>\",\"PeriodicalId\":14492,\"journal\":{\"name\":\"Iranian Journal of Biotechnology\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":1.6000,\"publicationDate\":\"2023-01-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://ftp.ncbi.nlm.nih.gov/pub/pmc/oa_pdf/a5/72/IJB-21-e3211.PMC9938929.pdf\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Iranian Journal of Biotechnology\",\"FirstCategoryId\":\"5\",\"ListUrlMain\":\"https://doi.org/10.30498/ijb.2022.317078.3211\",\"RegionNum\":4,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q4\",\"JCRName\":\"BIOTECHNOLOGY & APPLIED MICROBIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Iranian Journal of Biotechnology","FirstCategoryId":"5","ListUrlMain":"https://doi.org/10.30498/ijb.2022.317078.3211","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"BIOTECHNOLOGY & APPLIED MICROBIOLOGY","Score":null,"Total":0}
引用次数: 0

摘要

背景:已知miR-141和miR-200a的过表达与辅助性T细胞17 (Th17)的分化有关,Th17是自身免疫性疾病病理生理的关键参与者。然而,这两种microrna (mirna)在Th17细胞偏斜中的功能和调控机制尚不明确。目的:本研究的目的是鉴定miR-141和miR-200a的常见上游转录因子和下游靶基因,以更好地了解驱动miR-141/miR-200a介导的Th17细胞发育的可能失调的分子调控网络。材料和方法:采用基于共识的预测策略对miR-141和miR-200a的潜在转录因子和推测的基因靶点进行了计算机鉴定。随后,我们利用实时荧光定量PCR分析了候选转录因子和靶基因在人类Th17细胞分化过程中的表达模式,并利用双荧光素酶报告基因检测了这两种mirna与其潜在靶序列之间的直接相互作用。结果:根据我们基于mirna和基于基因的相互作用网络分析,我们分别考虑了b细胞前白血病同源盒(PBX1)和早期生长反应2 (EGR2)作为miR-141和miR-200a的潜在上游转录因子和下游靶基因。在Th17细胞诱导期,PBX1基因显著过表达。此外,这两种mirna都可以直接靶向EGR2并抑制其表达。作为EGR2的下游基因,细胞因子信号传导3抑制因子(SOCS3)在分化过程中也出现下调。结论:这些结果表明,PBX1/miR-141-miR-200a/EGR2/SOCS3轴的激活可能促进Th17细胞发育,从而触发或加剧Th17介导的自身免疫。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

The PBX1/miR-141-miR-200a/EGR2/SOCS3 Axis; Integrative Analysis of Interaction Networks to Discover the Possible Mechanism of MiR-141 and MiR-200a-Mediated Th17 Cell Differentiation.

The PBX1/miR-141-miR-200a/EGR2/SOCS3 Axis; Integrative Analysis of Interaction Networks to Discover the Possible Mechanism of MiR-141 and MiR-200a-Mediated Th17 Cell Differentiation.

The PBX1/miR-141-miR-200a/EGR2/SOCS3 Axis; Integrative Analysis of Interaction Networks to Discover the Possible Mechanism of MiR-141 and MiR-200a-Mediated Th17 Cell Differentiation.

The PBX1/miR-141-miR-200a/EGR2/SOCS3 Axis; Integrative Analysis of Interaction Networks to Discover the Possible Mechanism of MiR-141 and MiR-200a-Mediated Th17 Cell Differentiation.

Background: Overexpression of miR-141 and miR-200a is known to be associated with the differentiation of T helper 17 (Th17) cells, which are key players in the pathophysiology of autoimmune disorders. However, the function and governing mechanism of these two microRNAs (miRNAs) in Th17 cell skewing are poorly defined.

Objectives: The aim of the present study was to identify the common upstream transcription factors and downstream target genes of miR-141 and miR-200a to obtain a better insight into the possible dysregulated molecular regulatory networks driving miR-141/miR-200a-mediated Th17 cell development.

Materials and methods: A consensus-based prediction strategy was applied for in-silico identification of potential transcription factors and putative gene targets of miR-141 and miR-200a. Thereafter, we analyzed the expression patterns of candidate transcription factors and target genes during human Th17 cell differentiation by quantitative real-time PCR and examined the direct interaction between both miRNAs and their potential target sequences using dual-luciferase reporter assays.

Results: According to our miRNA-based and gene-based interaction network analyses, pre-B cell leukemia homeobox (PBX1) and early growth response 2 (EGR2) were respectively taken into account as the potential upstream transcription factor and downstream target gene of miR-141 and miR-200a. There was a significant overexpression of the PBX1 gene during the Th17 cell induction period. Furthermore, both miRNAs could directly target EGR2 and inhibit its expression. As a downstream gene of EGR2, the suppressor of cytokine signaling 3 (SOCS3) was also downregulated during the differentiation process.

Conclusions: These results indicate that activation of the PBX1/miR-141-miR-200a/EGR2/SOCS3 axis may promote Th17 cell development and, therefore, trigger or exacerbate Th17-mediated autoimmunity.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Iranian Journal of Biotechnology
Iranian Journal of Biotechnology BIOTECHNOLOGY & APPLIED MICROBIOLOGY-
CiteScore
2.60
自引率
7.70%
发文量
20
期刊介绍: Iranian Journal of Biotechnology (IJB) is published quarterly by the National Institute of Genetic Engineering and Biotechnology. IJB publishes original scientific research papers in the broad area of Biotechnology such as, Agriculture, Animal and Marine Sciences, Basic Sciences, Bioinformatics, Biosafety and Bioethics, Environment, Industry and Mining and Medical Sciences.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信