Jack McDonnell, Thomas McKenna, Kathryn A Yurkonis, Deirdre Hennessy, Rafael de Andrade Moral, Caroline Brophy
{"title":"多种植物相互作用对草地生物多样性和生态系统功能关系影响的混合模型","authors":"Jack McDonnell, Thomas McKenna, Kathryn A Yurkonis, Deirdre Hennessy, Rafael de Andrade Moral, Caroline Brophy","doi":"10.1007/s13253-022-00505-2","DOIUrl":null,"url":null,"abstract":"<p><p>In grassland ecosystems, it is well known that increasing plant species diversity can improve ecosystem functions (i.e., ecosystem responses), for example, by increasing productivity and reducing weed invasion. Diversity-Interactions models use species proportions and their interactions as predictors in a regression framework to assess biodiversity and ecosystem function relationships. However, it can be difficult to model numerous interactions if there are many species, and interactions may be temporally variable or dependent on spatial planting patterns. We developed a new Diversity-Interactions mixed model for jointly assessing many species interactions and within-plot species planting pattern over multiple years. We model pairwise interactions using a small number of fixed parameters that incorporate spatial effects and supplement this by including all pairwise interaction variables as random effects, each constrained to have the same variance within each year. The random effects are indexed by pairs of species within plots rather than a plot-level factor as is typical in mixed models, and capture remaining variation due to pairwise species interactions parsimoniously. We apply our novel methodology to three years of weed invasion data from a 16-species grassland experiment that manipulated plant species diversity and spatial planting pattern and test its statistical properties in a simulation study.Supplementary materials accompanying this paper appear online. Supplementary materials for this article are available at 10.1007/s13253-022-00505-2.</p>","PeriodicalId":56336,"journal":{"name":"Journal of Agricultural Biological and Environmental Statistics","volume":"28 1","pages":"1-19"},"PeriodicalIF":1.4000,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9908731/pdf/","citationCount":"2","resultStr":"{\"title\":\"A Mixed Model for Assessing the Effect of Numerous Plant Species Interactions on Grassland Biodiversity and Ecosystem Function Relationships.\",\"authors\":\"Jack McDonnell, Thomas McKenna, Kathryn A Yurkonis, Deirdre Hennessy, Rafael de Andrade Moral, Caroline Brophy\",\"doi\":\"10.1007/s13253-022-00505-2\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>In grassland ecosystems, it is well known that increasing plant species diversity can improve ecosystem functions (i.e., ecosystem responses), for example, by increasing productivity and reducing weed invasion. Diversity-Interactions models use species proportions and their interactions as predictors in a regression framework to assess biodiversity and ecosystem function relationships. However, it can be difficult to model numerous interactions if there are many species, and interactions may be temporally variable or dependent on spatial planting patterns. We developed a new Diversity-Interactions mixed model for jointly assessing many species interactions and within-plot species planting pattern over multiple years. We model pairwise interactions using a small number of fixed parameters that incorporate spatial effects and supplement this by including all pairwise interaction variables as random effects, each constrained to have the same variance within each year. The random effects are indexed by pairs of species within plots rather than a plot-level factor as is typical in mixed models, and capture remaining variation due to pairwise species interactions parsimoniously. We apply our novel methodology to three years of weed invasion data from a 16-species grassland experiment that manipulated plant species diversity and spatial planting pattern and test its statistical properties in a simulation study.Supplementary materials accompanying this paper appear online. 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A Mixed Model for Assessing the Effect of Numerous Plant Species Interactions on Grassland Biodiversity and Ecosystem Function Relationships.
In grassland ecosystems, it is well known that increasing plant species diversity can improve ecosystem functions (i.e., ecosystem responses), for example, by increasing productivity and reducing weed invasion. Diversity-Interactions models use species proportions and their interactions as predictors in a regression framework to assess biodiversity and ecosystem function relationships. However, it can be difficult to model numerous interactions if there are many species, and interactions may be temporally variable or dependent on spatial planting patterns. We developed a new Diversity-Interactions mixed model for jointly assessing many species interactions and within-plot species planting pattern over multiple years. We model pairwise interactions using a small number of fixed parameters that incorporate spatial effects and supplement this by including all pairwise interaction variables as random effects, each constrained to have the same variance within each year. The random effects are indexed by pairs of species within plots rather than a plot-level factor as is typical in mixed models, and capture remaining variation due to pairwise species interactions parsimoniously. We apply our novel methodology to three years of weed invasion data from a 16-species grassland experiment that manipulated plant species diversity and spatial planting pattern and test its statistical properties in a simulation study.Supplementary materials accompanying this paper appear online. Supplementary materials for this article are available at 10.1007/s13253-022-00505-2.
期刊介绍:
The Journal of Agricultural, Biological and Environmental Statistics (JABES) publishes papers that introduce new statistical methods to solve practical problems in the agricultural sciences, the biological sciences (including biotechnology), and the environmental sciences (including those dealing with natural resources). Papers that apply existing methods in a novel context are also encouraged. Interdisciplinary papers and papers that illustrate the application of new and important statistical methods using real data are strongly encouraged. The journal does not normally publish papers that have a primary focus on human genetics, human health, or medical statistics.