粉红色平菇(Pleurotus djamor var. salmoneostramineus)色素蛋白理化和生物学特性的计算机表征。

IF 2.3 Q3 BIOCHEMICAL RESEARCH METHODS
Mónica A Valdez-Solana, Erica K Ventura-García, Iván A Corral-Guerrero, Atahualpa Guzmán de Casa, Claudia Avitia-Domínguez, Alfredo Téllez-Valencia, Erick Sierra-Campos
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引用次数: 1

摘要

盖色是平菇重要的商品性状。不同的颜料成分决定了不同的颜色。然而,平菇的色素仍不明确。粉红色平菇(Pleurotus salmoneostramineus或Pleurotus djamor)的染色体蛋白是属于这种真菌的少数具有氨基酸残基序列记录的蛋白质之一。然而,尽管有关于该色素蛋白的分离、纯化和结晶的研究,但目前的信息主要集中在其三维模型和辅助因子和假基(3h -吲哚-3- 1)结合位点上,这些信息是不可靠的和碎片化的。因此,本研究利用Prot pi、GalaxyWEB、MIB、CB-Dock2等免费在线服务器,对其进行结构分析和理化生物学特性预测,了解其可能的功能。结果表明,该蛋白分子量为23 712.5 Da,等电点为7.505,具有二聚体寡聚和Ser6残基糖基化的能力。此外,还强调了残基Leu5、Leu8、Lys211、Ala214和Gln215参与了假体基与蛋白的结合;以及Ser6和Pro7是Mg2+离子与真黑色素相互作用的重要残基。同样,基于不同培养条件(光/暗)的形态学变化表明,该蛋白是组成型表达的,不受蓝光的影响。本研究结果表明,粉红色染色体蛋白是一种黑素体蛋白,它可能在黑色素形成和黑色素聚合中起关键作用。然而,需要更多的实验研究来预测可能的作用机制和酶活性类型。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

In Silico Characterization of the Physicochemical and Biological Properties of the Pink (<i>Pleurotus djamor</i> var. <i>salmoneostramineus</i>) Oyster Mushroom Chromoprotein.

In Silico Characterization of the Physicochemical and Biological Properties of the Pink (<i>Pleurotus djamor</i> var. <i>salmoneostramineus</i>) Oyster Mushroom Chromoprotein.

In Silico Characterization of the Physicochemical and Biological Properties of the Pink (<i>Pleurotus djamor</i> var. <i>salmoneostramineus</i>) Oyster Mushroom Chromoprotein.

In Silico Characterization of the Physicochemical and Biological Properties of the Pink (Pleurotus djamor var. salmoneostramineus) Oyster Mushroom Chromoprotein.

Cap color is an important commercial trait for oyster mushrooms. Various pigment constituents determine a diverse color. However, the pigments of oyster mushrooms are still ambiguous. The pink oyster mushroom (Pleurotus salmoneostramineus or Pleurotus djamor) chromoprotein is one of the few proteins belonging to this fungus that has a record of its sequence of amino acid residues. However, even though there are studies about this chromoprotein isolation, purification, and crystallization, the current information focused on its 3-dimensional model and the cofactor and prosthetic group (3H-indol-3-one) binding sites is unreliable and fragmented. Therefore, in this study, using free online servers such as Prot pi, GalaxyWEB, MIB, and CB-Dock2, a structural analysis and the prediction of its physicochemical and biological properties were conducted, to understand the possible function of this chromoprotein. The obtained results showed that this molecule is a protein with a molecular weight of 23 712.5 Da, an isoelectric point of 7.505, with oligomerization capacity in a dimer and glycation in the Ser6 residue. In addition, the participation of the residues Leu5, Leu8, Lys211, Ala214, and Gln215 in the binding of the prosthetic group to the protein was highlighted; as well as Ser6 and Pro7 are important residues for the interaction of the Mg2+ ion and eumelanin. Likewise, morphological changes based on different culture conditions (light/dark) showed that this protein is constitutive expressed and independent of blue light. The findings in this study demonstrate that pink chromoprotein is a melanosomal protein, and it possibly has a critical role in melanogenesis and the melanin polymerization. However, more experimental studies are needed to predict a possible mechanism of action and type of enzymatic activity.

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来源期刊
Bioinformatics and Biology Insights
Bioinformatics and Biology Insights BIOCHEMICAL RESEARCH METHODS-
CiteScore
6.80
自引率
1.70%
发文量
36
审稿时长
8 weeks
期刊介绍: Bioinformatics and Biology Insights is an open access, peer-reviewed journal that considers articles on bioinformatics methods and their applications which must pertain to biological insights. All papers should be easily amenable to biologists and as such help bridge the gap between theories and applications.
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