乔治梅森大学的药物发现工作。

IF 2.7 4区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS
Ali Andalibi , Remi Veneziano , Mikell Paige , Michael Buschmann , Amanda Haymond , Virginia Espina , Alessandra Luchini , Lance Liotta , Barney Bishop , Monique Van Hoek
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引用次数: 1

摘要

乔治梅森大学(GMU)拥有39000多名学生,研究支出超过2亿美元,是弗吉尼亚州最大的R1(卡内基非常高研究活动分类)大学。梅森的科学家们一直在传染病和癌症等不同领域参与新诊断和治疗方法的发现和开发。以下是梅森研究人员在药物发现领域所做努力的亮点。为了实现靶向细胞递送和非生物医学应用,Veneziano及其同事开发了一种合成策略,能够设计出具有10至100nm范围内规定形状和尺寸的自组装DNA纳米颗粒(DNA折纸)。纳米颗粒可以装载感兴趣的分子,如药物、蛋白质和肽,是目前使用的药物递送平台的一个有前途的新添加。研究人员最近还使用DNA折纸纳米颗粒来微调免疫原的空间呈现,以研究对B细胞活化的影响。这些研究是为各种传染源合理设计疫苗的重要一步。为了阐明优化脂质纳米颗粒(LNP)递送效率的参数,Buschmann、Paige及其同事设计了基于用于配制LNP的可电离脂质的结构来预测和实验验证LNP的pKa的方法。这些研究可能为开发新的LNP运载工具铺平道路,这些运载工具减少了系统分布,改善了给药后货物的内体释放。为了更好地了解蛋白质-蛋白质相互作用,并确定破坏这种相互作用的潜在药物靶点,Luchini及其同事开发了一种使用小分子染料识别蛋白质之间接触点的方法。染料分子以非常高的亲和力与蛋白质复合物的可接触表面非共价结合,但被排除在接触区域之外。当复合物变性并用胰蛋白酶消化时,染料覆盖的暴露区域不会被酶切割,而接触点被消化。然后可以使用质谱法鉴定得到的片段。产生的数据可以作为设计小分子和肽的基础,这些小分子和小肽可以破坏参与疾病过程的蛋白质复合物的形成。例如,使用基于白细胞介素1受体辅助蛋白(IL-1RAcP)的肽,Luchini、Liotta、Paige及其同事破坏了IL-1/IL-R/IL-1RAcP复合物的形成,并证明对复合物形成的抑制降低了对IL-1B的炎症反应。毕晓普、范霍克及其同事在发现新型抗菌剂的过程中,从爬行动物和其他物种身上发现了许多抗菌肽。DRGN-1是一种基于组蛋白H1衍生肽的合成肽,他们已从科莫多龙血浆中鉴定出该肽。DRGN-1在动物模型中被证明可以破坏细菌生物膜并促进伤口愈合。该肽和其他肽正在临床前研究中进行开发和测试。van Hoek及其同事的其他研究重点是在计算机上发现抗菌肽,筛选具有抗菌特性的小分子,以及评估作为未来治疗方法的扩散信号因子(DFS)。上述例子深入了解了GMU科学家为开发对药物发现重要的新方法和平台技术而进行的尖端研究。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Drug discovery efforts at George Mason University

With over 39,000 students, and research expenditures in excess of $200 million, George Mason University (GMU) is the largest R1 (Carnegie Classification of very high research activity) university in Virginia. Mason scientists have been involved in the discovery and development of novel diagnostics and therapeutics in areas as diverse as infectious diseases and cancer. Below are highlights of the efforts being led by Mason researchers in the drug discovery arena.

To enable targeted cellular delivery, and non-biomedical applications, Veneziano and colleagues have developed a synthesis strategy that enables the design of self-assembling DNA nanoparticles (DNA origami) with prescribed shape and size in the 10 to 100 nm range. The nanoparticles can be loaded with molecules of interest such as drugs, proteins and peptides, and are a promising new addition to the drug delivery platforms currently in use. The investigators also recently used the DNA origami nanoparticles to fine tune the spatial presentation of immunogens to study the impact on B cell activation. These studies are an important step towards the rational design of vaccines for a variety of infectious agents.

To elucidate the parameters for optimizing the delivery efficiency of lipid nanoparticles (LNPs), Buschmann, Paige and colleagues have devised methods for predicting and experimentally validating the pKa of LNPs based on the structure of the ionizable lipids used to formulate the LNPs. These studies may pave the way for the development of new LNP delivery vehicles that have reduced systemic distribution and improved endosomal release of their cargo post administration.

To better understand protein-protein interactions and identify potential drug targets that disrupt such interactions, Luchini and colleagues have developed a methodology that identifies contact points between proteins using small molecule dyes. The dye molecules noncovalently bind to the accessible surfaces of a protein complex with very high affinity, but are excluded from contact regions. When the complex is denatured and digested with trypsin, the exposed regions covered by the dye do not get cleaved by the enzyme, whereas the contact points are digested. The resulting fragments can then be identified using mass spectrometry. The data generated can serve as the basis for designing small molecules and peptides that can disrupt the formation of protein complexes involved in disease processes. For example, using peptides based on the interleukin 1 receptor accessory protein (IL-1RAcP), Luchini, Liotta, Paige and colleagues disrupted the formation of IL-1/IL-R/IL-1RAcP complex and demonstrated that the inhibition of complex formation reduced the inflammatory response to IL-1B.

Working on the discovery of novel antimicrobial agents, Bishop, van Hoek and colleagues have discovered a number of antimicrobial peptides from reptiles and other species. DRGN-1, is a synthetic peptide based on a histone H1-derived peptide that they had identified from Komodo Dragon plasma. DRGN-1 was shown to disrupt bacterial biofilms and promote wound healing in an animal model. The peptide, along with others, is being developed and tested in preclinical studies. Other research by van Hoek and colleagues focuses on in silico antimicrobial peptide discovery, screening of small molecules for antibacterial properties, as well as assessment of diffusible signal factors (DFS) as future therapeutics.

The above examples provide insight into the cutting-edge studies undertaken by GMU scientists to develop novel methodologies and platform technologies important to drug discovery.

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来源期刊
SLAS Discovery
SLAS Discovery Chemistry-Analytical Chemistry
CiteScore
7.00
自引率
3.20%
发文量
58
审稿时长
39 days
期刊介绍: Advancing Life Sciences R&D: SLAS Discovery reports how scientists develop and utilize novel technologies and/or approaches to provide and characterize chemical and biological tools to understand and treat human disease. SLAS Discovery is a peer-reviewed journal that publishes scientific reports that enable and improve target validation, evaluate current drug discovery technologies, provide novel research tools, and incorporate research approaches that enhance depth of knowledge and drug discovery success. SLAS Discovery emphasizes scientific and technical advances in target identification/validation (including chemical probes, RNA silencing, gene editing technologies); biomarker discovery; assay development; virtual, medium- or high-throughput screening (biochemical and biological, biophysical, phenotypic, toxicological, ADME); lead generation/optimization; chemical biology; and informatics (data analysis, image analysis, statistics, bio- and chemo-informatics). Review articles on target biology, new paradigms in drug discovery and advances in drug discovery technologies. SLAS Discovery is of particular interest to those involved in analytical chemistry, applied microbiology, automation, biochemistry, bioengineering, biomedical optics, biotechnology, bioinformatics, cell biology, DNA science and technology, genetics, information technology, medicinal chemistry, molecular biology, natural products chemistry, organic chemistry, pharmacology, spectroscopy, and toxicology. SLAS Discovery is a member of the Committee on Publication Ethics (COPE) and was published previously (1996-2016) as the Journal of Biomolecular Screening (JBS).
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