{"title":"金黄色葡萄球菌荚膜多糖合成酶CapG的晶体结构","authors":"Ni Tien, Chien-Yi Ho, Shu-Jung Lai, Yu-Chuan Lin, Chia-Shin Yang, Yu-Chuan Wang, Wei-Chien Huang, Yeh Chen, Jui-Jen Chang","doi":"10.1107/S2053230X22008743","DOIUrl":null,"url":null,"abstract":"<p>Bacterial capsular polysaccharides provide protection against environmental stress and immune evasion from the host immune system, and are therefore considered to be attractive therapeutic targets for the development of anti-infectious reagents. Here, we focused on CapG, one of the key enzymes in the synthesis pathway of capsular polysaccharides type 5 (CP5) from the opportunistic pathogen <i>Staphylococcus aureus</i>. <i>Sa</i>CapG catalyses the 2-epimerization of UDP-<i>N</i>-acetyl-<span>d</span>-talosamine (UDP-TalNAc) to UDP-<i>N</i>-acetyl-<span>d</span>-fucosamine (UDP-FucNAc), which is one of the nucleotide-activated precursors for the synthesis of the trisaccharide repeating units of CP5. Here, the cloning, expression and purification of recombinant <i>Sa</i>CapG are reported. After extensive efforts, single crystals of <i>Sa</i>CapG were successfully obtained which belonged to space group <i>C</i>2 and exhibited unit-cell parameters <i>a</i> = 302.91, <i>b</i> = 84.34, <i>c</i> = 145.09 Å, β = 110.65°. The structure was solved by molecular replacement and was refined to 3.2 Å resolution. The asymmetric unit revealed a homohexameric assembly of <i>Sa</i>CapG, which was consistent with gel-filtration analysis. Structural comparison with UDP-<i>N</i>-acetyl-<span>d</span>-glucosamine 2-epimerase from <i>Methanocaldococcus jannaschii</i> identified α2, the α2–α3 loop and α10 as a gate-regulated switch controlling substrate entry and/or product release.</p>","PeriodicalId":7029,"journal":{"name":"Acta crystallographica. Section F, Structural biology communications","volume":"78 11","pages":"378-385"},"PeriodicalIF":1.1000,"publicationDate":"2022-10-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"1","resultStr":"{\"title\":\"Crystal structure of the capsular polysaccharide-synthesis enzyme CapG from Staphylococcus aureus\",\"authors\":\"Ni Tien, Chien-Yi Ho, Shu-Jung Lai, Yu-Chuan Lin, Chia-Shin Yang, Yu-Chuan Wang, Wei-Chien Huang, Yeh Chen, Jui-Jen Chang\",\"doi\":\"10.1107/S2053230X22008743\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p>Bacterial capsular polysaccharides provide protection against environmental stress and immune evasion from the host immune system, and are therefore considered to be attractive therapeutic targets for the development of anti-infectious reagents. Here, we focused on CapG, one of the key enzymes in the synthesis pathway of capsular polysaccharides type 5 (CP5) from the opportunistic pathogen <i>Staphylococcus aureus</i>. <i>Sa</i>CapG catalyses the 2-epimerization of UDP-<i>N</i>-acetyl-<span>d</span>-talosamine (UDP-TalNAc) to UDP-<i>N</i>-acetyl-<span>d</span>-fucosamine (UDP-FucNAc), which is one of the nucleotide-activated precursors for the synthesis of the trisaccharide repeating units of CP5. Here, the cloning, expression and purification of recombinant <i>Sa</i>CapG are reported. After extensive efforts, single crystals of <i>Sa</i>CapG were successfully obtained which belonged to space group <i>C</i>2 and exhibited unit-cell parameters <i>a</i> = 302.91, <i>b</i> = 84.34, <i>c</i> = 145.09 Å, β = 110.65°. The structure was solved by molecular replacement and was refined to 3.2 Å resolution. The asymmetric unit revealed a homohexameric assembly of <i>Sa</i>CapG, which was consistent with gel-filtration analysis. Structural comparison with UDP-<i>N</i>-acetyl-<span>d</span>-glucosamine 2-epimerase from <i>Methanocaldococcus jannaschii</i> identified α2, the α2–α3 loop and α10 as a gate-regulated switch controlling substrate entry and/or product release.</p>\",\"PeriodicalId\":7029,\"journal\":{\"name\":\"Acta crystallographica. Section F, Structural biology communications\",\"volume\":\"78 11\",\"pages\":\"378-385\"},\"PeriodicalIF\":1.1000,\"publicationDate\":\"2022-10-14\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"1\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Acta crystallographica. 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引用次数: 1
摘要
细菌荚膜多糖具有抗环境胁迫和逃避宿主免疫系统的保护作用,因此被认为是开发抗感染试剂的有吸引力的治疗靶点。本文重点研究了条件致病菌金黄色葡萄球菌(Staphylococcus aureus)合成5型荚膜多糖(CP5)途径中的关键酶之一CapG。SaCapG催化udp - n -乙酰-d- talnac的2-外映反应生成udp - n -乙酰-d- focusamine (UDP-FucNAc),这是合成CP5三糖重复单元的核苷酸激活前体之一。本文报道了重组SaCapG基因的克隆、表达和纯化。经过大量的努力,成功地获得了SaCapG单晶,该单晶属于空间群C2,其单晶参数为a = 302.91, b = 84.34, c = 145.09 Å, β = 110.65°。通过分子置换对结构进行求解,并将其细化到3.2 Å分辨率。不对称单元显示SaCapG为同六聚体,这与凝胶过滤分析一致。与jannaschii Methanocaldococcus的UDP-N-acetyl-d-glucosamine 2- epimase的结构比较发现α2、α2 -α3环和α10是控制底物进入和/或产物释放的门控开关。
Crystal structure of the capsular polysaccharide-synthesis enzyme CapG from Staphylococcus aureus
Bacterial capsular polysaccharides provide protection against environmental stress and immune evasion from the host immune system, and are therefore considered to be attractive therapeutic targets for the development of anti-infectious reagents. Here, we focused on CapG, one of the key enzymes in the synthesis pathway of capsular polysaccharides type 5 (CP5) from the opportunistic pathogen Staphylococcus aureus. SaCapG catalyses the 2-epimerization of UDP-N-acetyl-d-talosamine (UDP-TalNAc) to UDP-N-acetyl-d-fucosamine (UDP-FucNAc), which is one of the nucleotide-activated precursors for the synthesis of the trisaccharide repeating units of CP5. Here, the cloning, expression and purification of recombinant SaCapG are reported. After extensive efforts, single crystals of SaCapG were successfully obtained which belonged to space group C2 and exhibited unit-cell parameters a = 302.91, b = 84.34, c = 145.09 Å, β = 110.65°. The structure was solved by molecular replacement and was refined to 3.2 Å resolution. The asymmetric unit revealed a homohexameric assembly of SaCapG, which was consistent with gel-filtration analysis. Structural comparison with UDP-N-acetyl-d-glucosamine 2-epimerase from Methanocaldococcus jannaschii identified α2, the α2–α3 loop and α10 as a gate-regulated switch controlling substrate entry and/or product release.
期刊介绍:
Acta Crystallographica Section F is a rapid structural biology communications journal.
Articles on any aspect of structural biology, including structures determined using high-throughput methods or from iterative studies such as those used in the pharmaceutical industry, are welcomed by the journal.
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