动态共轭入口排斥蛋白 TraG 的溶液特征。

IF 2.3 2区 物理与天体物理 Q3 CHEMISTRY, PHYSICAL
Structural Dynamics-Us Pub Date : 2022-12-27 eCollection Date: 2022-11-01 DOI:10.1063/4.0000171
Nicholas Bragagnolo, Gerald F Audette
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引用次数: 0

摘要

R100 质粒及其编码的分泌系统是革兰氏阴性细菌中传播移动 DNA 元素的 F 类共轭 IV 型分泌系统的代表,是细菌病原体抗生素耐药性传播的主要因素。F 型系统的 TraG 蛋白由一个膜结合 N 端结构域和一个围质体 C 端结构域(TraG*)组成。TraG* 在通过一种称为 "入口排斥 "的过程防止多余 DNA 转移方面至关重要。在供体细胞中,它与 TraN 相互作用,促进交配对的稳定;但是,如果具有相同质粒的细菌之间形成了交配孔,TraG* 就会与受体细菌内膜上的同源物 TraS 相互作用,防止供体-受体的冗余共轭。对来自 R100 质粒的 TraG* 的结构研究发现,在 TraG 的 N 端和 C 端结构域之间存在一个动态区域。与多角光散射和小角 X 射线散射实验相关联的热荧光、圆二色、碰撞诱导解折质谱法和尺寸排阻色谱法表明,与全长 TraG* 相比,N 端截短突变体显示出更高的稳定性和更少的无序含量。据推测,TraG* 的 45 个 N 端残基是两个独立功能域之间柔性连接体的一部分。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Solution characterization of the dynamic conjugative entry exclusion protein TraG.

The R100 plasmid and the secretion system it encodes are representative of F-like conjugative type IV secretion systems for the transmission of mobile DNA elements in gram-negative bacteria, serving as a major contributor to the spread of antibiotic resistance in bacterial pathogens. The TraG protein of F-like systems consists of a membrane-bound N-terminal domain and a periplasmic C-terminal domain, denoted TraG*. TraG* is essential in preventing redundant DNA transfer through a process termed entry exclusion. In the donor cell, it interacts with TraN to facilitate mating pair stabilization; however, if a mating pore forms between bacteria with identical plasmids, TraG* interacts with its cognate TraS in the inner membrane of the recipient bacterium to prevent redundant donor-donor conjugation. Structural studies of TraG* from the R100 plasmid have revealed the presence of a dynamic region between the N- and C-terminal domains of TraG. Thermofluor, circular dichroism, collision-induced unfolding-mass spectrometry, and size exclusion chromatography linked to multiangle light scattering and small angle x-ray scattering experiments indicated an N-terminal truncation mutant displayed higher stability and less disordered content relative to full-length TraG*. The 45 N-terminal residues of TraG* are hypothesized to serve as part of a flexible linker between the two independently functioning domains.

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来源期刊
Structural Dynamics-Us
Structural Dynamics-Us CHEMISTRY, PHYSICALPHYSICS, ATOMIC, MOLECU-PHYSICS, ATOMIC, MOLECULAR & CHEMICAL
CiteScore
5.50
自引率
3.60%
发文量
24
审稿时长
16 weeks
期刊介绍: Structural Dynamics focuses on the recent developments in experimental and theoretical methods and techniques that allow a visualization of the electronic and geometric structural changes in real time of chemical, biological, and condensed-matter systems. The community of scientists and engineers working on structural dynamics in such diverse systems often use similar instrumentation and methods. The journal welcomes articles dealing with fundamental problems of electronic and structural dynamics that are tackled by new methods, such as: Time-resolved X-ray and electron diffraction and scattering, Coherent diffractive imaging, Time-resolved X-ray spectroscopies (absorption, emission, resonant inelastic scattering, etc.), Time-resolved electron energy loss spectroscopy (EELS) and electron microscopy, Time-resolved photoelectron spectroscopies (UPS, XPS, ARPES, etc.), Multidimensional spectroscopies in the infrared, the visible and the ultraviolet, Nonlinear spectroscopies in the VUV, the soft and the hard X-ray domains, Theory and computational methods and algorithms for the analysis and description of structuraldynamics and their associated experimental signals. These new methods are enabled by new instrumentation, such as: X-ray free electron lasers, which provide flux, coherence, and time resolution, New sources of ultrashort electron pulses, New sources of ultrashort vacuum ultraviolet (VUV) to hard X-ray pulses, such as high-harmonic generation (HHG) sources or plasma-based sources, New sources of ultrashort infrared and terahertz (THz) radiation, New detectors for X-rays and electrons, New sample handling and delivery schemes, New computational capabilities.
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