利用bdmax™开放系统快速检测碳青霉烯酶产生基因的多重实时聚合酶链反应和熔解曲线分析。

Akihiro Nakamura, Kaichi Ohta, Masaru Komatsu
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引用次数: 0

摘要

近年来,产碳青霉烯酶肠杆菌的全球传播已成为人们关注的问题,需要快速检测方法。我们开发了一种快速、廉价的多重实时PCR,使用BD MAX™系统进行熔化曲线分析,并对其进行了评估。我们选用31株产碳青霉烯酶革兰氏阴性菌(blaIMP组,12株;blaGES组,6;blaNDM组,5;blaVIM组,3;blaKPC组,3;blaoxa -48样组1株;blaIMP组+ blaGES, 1株),产ampc革兰氏阴性菌10株,产esblg革兰氏阴性菌10株。采用BD MAX™开放式平台系统。31株碳青霉烯酶阳性菌株和阴性菌株(blaIMP组和blaGES组共编码菌株除外)和20株碳青霉烯酶阴性菌株分别正确鉴定30株和20株。各基因的熔化温度(Tm)值如下:blaIMP组,81.2±0.5°C;blaVIM组,91.8±0.4°C;blaNDM组,85.4±0.3°C;blaGES组,90.5±0.3°C;blaKPC组,94.1±0.5°C;blaoxa -48样组,82.1℃。从Tm值可以鉴定出不同的基因型。然而,同时产生blaIMP组和blaGES组的菌株只能检测到blaGES组的一个峰,这表明在同时产生blaIMP组和blaGES组的菌株中只能捕获到表达水平最高的基因型。在碳青霉烯酶阴性菌株中,20株AmpC和20株产esbl的革兰氏阴性菌未见明显的峰,即使检测Tm值,dF/dT值也较低,容易分化。作为一种快速、廉价的检测方法,这种方法似乎非常有用,可以在大约2小时内提供检测结果。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Rapid Detection of Carbapenemase-producing Genes by Multiplex Real-Time PCR with Melting Curve Analysis using a BD MAX™ Open System.

Recently, the global spread of carbapenemase-producing Enterobacterales has become a concern, and rapid detection methods are required. We have developed a rapid and inexpensive multiplex real-time PCR with melting curve analysis using the BD MAX™ system and evaluated it. We used 31 carbapenemase-producing Gram-negative bacteria (blaIMP group, 12; blaGES group, 6; blaNDM group, 5; blaVIM group, 3; blaKPC group, 3; blaOXA-48-like group, 1 strain; and blaIMP group + blaGES, 1 strain), 10 AmpC-producing Gram-negative bacteria, and 10 ESBLproducing Gram-negative bacteria. A BD MAX™ open platform system was used. Carbapenemase-positive and carbapenemase-negative strains were correctly identified 30 of 31 (excluding a blaIMP group and blaGES group co-coding strain) and all 20 of 20 isolates, respectively. Melting temperature (Tm) values of the various genes were as follows: blaIMP group, 81.2±0.5°C; blaVIM group, 91.8±0.4°C; blaNDM group, 85.4±0.3°C; blaGES group, 90.5±0.3°C; blaKPC group, 94.1±0.5°C; and blaOXA-48-like group, 82.1°C. Identification of the various genotypes was possible from the Tm values. However, only a peak derived from the blaGES group could be detected in the strains producing both blaIMP group and blaGES group simultaneously, suggesting that only the genotype with the highest expression level could be captured in cases of simultaneous production. In the carbapenemase-negative strains, no obvious peaks were observed in the 20 AmpC and 20 ESBL-producing Gram-negative bacteria, and even when Tm values were detected, the dF/dT values were low and easily differentiated. This method appears to be very useful as a rapid and inexpensive test that can provide detection in about 2 hours.

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