{"title":"关于单个外加剂估计不确定性的中心极限定理","authors":"Peter Pfaffelhuber, Angelika Rohde","doi":"10.1016/j.tpb.2022.09.003","DOIUrl":null,"url":null,"abstract":"<div><p>The concept of individual admixture (IA) assumes that the genome of individuals is composed of alleles inherited from <span><math><mi>K</mi></math></span> ancestral populations. Each copy of each allele has the same chance <span><math><msub><mrow><mi>q</mi></mrow><mrow><mi>k</mi></mrow></msub></math></span> to originate from population <span><math><mi>k</mi></math></span>, and together with the allele frequencies <span><math><mi>p</mi></math></span> in all populations at all <span><math><mi>M</mi></math></span> markers, comprises the admixture model. Here, we assume a supervised scheme, i.e. allele frequencies <span><math><mi>p</mi></math></span> are given through a reference database of size <span><math><mi>N</mi></math></span>, and <span><math><mi>q</mi></math></span> is estimated via maximum likelihood for a single sample. We study laws of large numbers and central limit theorems describing effects of finiteness of both, <span><math><mi>M</mi></math></span> and <span><math><mi>N</mi></math></span>, on the estimate of <span><math><mi>q</mi></math></span>. We recall results for the effect of finite <span><math><mi>M</mi></math></span>, and provide a central limit theorem for the effect of finite <span><math><mi>N</mi></math></span>, introduce a new way to express the uncertainty in estimates in standard barplots, give simulation results, and discuss applications in forensic genetics.</p></div>","PeriodicalId":1,"journal":{"name":"Accounts of Chemical Research","volume":null,"pages":null},"PeriodicalIF":16.4000,"publicationDate":"2022-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"A central limit theorem concerning uncertainty in estimates of individual admixture\",\"authors\":\"Peter Pfaffelhuber, Angelika Rohde\",\"doi\":\"10.1016/j.tpb.2022.09.003\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>The concept of individual admixture (IA) assumes that the genome of individuals is composed of alleles inherited from <span><math><mi>K</mi></math></span> ancestral populations. Each copy of each allele has the same chance <span><math><msub><mrow><mi>q</mi></mrow><mrow><mi>k</mi></mrow></msub></math></span> to originate from population <span><math><mi>k</mi></math></span>, and together with the allele frequencies <span><math><mi>p</mi></math></span> in all populations at all <span><math><mi>M</mi></math></span> markers, comprises the admixture model. Here, we assume a supervised scheme, i.e. allele frequencies <span><math><mi>p</mi></math></span> are given through a reference database of size <span><math><mi>N</mi></math></span>, and <span><math><mi>q</mi></math></span> is estimated via maximum likelihood for a single sample. We study laws of large numbers and central limit theorems describing effects of finiteness of both, <span><math><mi>M</mi></math></span> and <span><math><mi>N</mi></math></span>, on the estimate of <span><math><mi>q</mi></math></span>. We recall results for the effect of finite <span><math><mi>M</mi></math></span>, and provide a central limit theorem for the effect of finite <span><math><mi>N</mi></math></span>, introduce a new way to express the uncertainty in estimates in standard barplots, give simulation results, and discuss applications in forensic genetics.</p></div>\",\"PeriodicalId\":1,\"journal\":{\"name\":\"Accounts of Chemical Research\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":16.4000,\"publicationDate\":\"2022-12-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Accounts of Chemical Research\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0040580922000661\",\"RegionNum\":1,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"CHEMISTRY, MULTIDISCIPLINARY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Accounts of Chemical Research","FirstCategoryId":"99","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0040580922000661","RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"CHEMISTRY, MULTIDISCIPLINARY","Score":null,"Total":0}
A central limit theorem concerning uncertainty in estimates of individual admixture
The concept of individual admixture (IA) assumes that the genome of individuals is composed of alleles inherited from ancestral populations. Each copy of each allele has the same chance to originate from population , and together with the allele frequencies in all populations at all markers, comprises the admixture model. Here, we assume a supervised scheme, i.e. allele frequencies are given through a reference database of size , and is estimated via maximum likelihood for a single sample. We study laws of large numbers and central limit theorems describing effects of finiteness of both, and , on the estimate of . We recall results for the effect of finite , and provide a central limit theorem for the effect of finite , introduce a new way to express the uncertainty in estimates in standard barplots, give simulation results, and discuss applications in forensic genetics.
期刊介绍:
Accounts of Chemical Research presents short, concise and critical articles offering easy-to-read overviews of basic research and applications in all areas of chemistry and biochemistry. These short reviews focus on research from the author’s own laboratory and are designed to teach the reader about a research project. In addition, Accounts of Chemical Research publishes commentaries that give an informed opinion on a current research problem. Special Issues online are devoted to a single topic of unusual activity and significance.
Accounts of Chemical Research replaces the traditional article abstract with an article "Conspectus." These entries synopsize the research affording the reader a closer look at the content and significance of an article. Through this provision of a more detailed description of the article contents, the Conspectus enhances the article's discoverability by search engines and the exposure for the research.