[IgG Fc结合蛋白(FCGBP)作为低级别胶质瘤预后标志物及其与免疫浸润的相关性分析]。

Qiao Liu, Jiarui Zhang, Fuqin Zhang, Wei Zhang, Li Gong
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引用次数: 0

摘要

目的探讨IgG Fc结合蛋白(FCGBP)作为低级别胶质瘤(LGG)预后标志物的可能性及其与免疫浸润的关系。方法采用Cancer Genome Atlas (TCGA)、genotype tissue expression (GTEX)和China Glioma Genome Atlas (CGGA)数据库分析FCGBP在泛癌组织中的表达。然后选择GSE15824和GSE68848数据集进行进一步验证。采用基因表达谱相互作用分析(GEPIA)数据库和R语言分析FCGBP与生存预后的关系。metscape和GSEA用于功能注释和富集分析。最后通过TIMER数据库分析fggbp基因在LGG免疫微环境中的表达及其与免疫细胞的相关性。结果fggbp在LGG组织中高表达,提示LGG患者预后较差。受试者工作特征(ROC)曲线分析和COX分析显示,FCGBP是影响LGG预后的独立危险因素。此外,基因本体(Gene Ontology, GO)表明,FCGBP参与细胞代谢、定位、生物过程的正、负调控,以及生物粘附、对病毒和微生物刺激的反应和炎症反应。GSEA通路富集分析显示,FCGBP与Janus kinase/signal transducer and activator of transcription (JAK/STAT)通路、toll样受体(Toll-like receptor, TLR)通路、趋化因子通路、P53通路存在显著相关性。此外,在LGG免疫微环境中,FCGBP的表达与大多数免疫细胞的表达呈正相关。结论fggbp在LGG中高表达是影响生存和预后的危险因素,且与免疫细胞表达呈正相关。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
[IgG Fc binding protein (FCGBP) as a prognostic marker of low-grade glioma and its correlation analysis with immune infiltration].

Objective To identify the possibility of IgG Fc binding protein (FCGBP) acting as a prognostic marker of low-grade glioma (LGG) and its correlation with immune infiltration. Methods The expression of FCGBP was analyzed in pan-cancer using The Cancer Genome Atlas (TCGA), Genotypic tissue expression (GTEX), and China Glioma Genome Atlas (CGGA) database. Then, GSE15824 and GSE68848 datasets were selected for further verification. And gene expression Profile Interaction analysis (GEPIA) database and R language were used to analyze the relationship between FCGBP and survival prognosis. Metascape and GSEA were used for functional annotation and enrichment analysis. Finally, the expression of FCGBP gene in LGG immune microenvironment and its correlation with immune cells were analyzed by TIMER database. Results FCGBP was highly expressed in LGG tissues, indicating poor prognosis of LGG patients. Receiver operating characteristic (ROC) curve analysis and COX analysis showed that FCGBP was an independent risk factor for the prognosis of LGG. Moreover, Gene Ontology (GO) demonstrated that FCGBP was involved in cell metabolism, localization, positive, and negative regulation of biological processes, as well as biological adhesion, response to viral and microbial stimulation, and inflammation. GSEA pathway enrichment analysis showed that FCGBP was significantly correlated with Janus kinase/signal transducer and activator of transcription (JAK/STAT) pathway, Toll-like receptor (TLR) pathway, chemokine pathway, and P53 pathway. In addition, FCGBP expression was positively correlated with the expression of most immune cells in the immune microenvironment of LGG. Conclusion The high expression of FCGBP in LGG is a risk factor for survival and prognosis, and it is positively correlated with the expression of immune cells.

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