基于对接模拟和ADMET预测的诺丽果潜在抗癌药物的植物化学成分研究

Kaliraj Chandran, Drose Ignatious Shane, Azar Zochedh, Asath Bahadur Sultan, Thandavarayan Kathiresan
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引用次数: 17

摘要

桑葚是一种传统的植物,在亚洲和非洲国家使用,因为它具有广泛的营养和治疗各种疾病的效果。枸杞子具有抗菌、抗氧化、抗癌等多种生物学特性。基于分子对接的研究;我们研究了枸杞果实中约23种生物活性化学物质对人类癌症的抑制作用。选择MAPK6(丝裂原活化蛋白激酶6)作为靶蛋白,并将这23种植物化学物质与已知的MAPK6抑制剂对接到靶蛋白上。活性植物化学物质与MAPK6蛋白的对接分数在- 4.5 ~ - 7.9 kcal/mol之间,与标准药物(CID: 447077)的对接分数为- 7.3 kcal/mol。根据5种植物化学物质的结合亲和力,选择紫苏苷(- 6.7 kcal/mol)、紫苏苷酸(- 7.2 kcal/mol)、去乙酰甲葡苷酸(- 7.0 kcal/mol)、丁香酚(- 6.8 kcal/mol)和芦丁(- 7.9 kcal/mol)进行进一步评价。通过RC图分析、密度泛函理论和ADMET性质对这5种化合物进行了进一步的研究。通过RC图观察到蛋白-配体相互作用的稳定连锁,密度函数理论通过HOMO和LUMO之间的能隙表明了生物活性化合物的结构稳定性和反应性,ADMET(吸附、分布、代谢、排泄和毒性)研究表明了生物活性化合物的安全性。通过体内和体外评价,这些结果支持了枸杞果实在传统药物中的利用,并为开发抗癌新药提供了起点。补充信息:在线版本包含补充资料,提供地址为10.1007/s40203-022-00130-4。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Docking simulation and ADMET prediction based investigation on the phytochemical constituents of Noni (<i>Morinda citrifolia</i>) fruit as a potential anticancer drug.

Docking simulation and ADMET prediction based investigation on the phytochemical constituents of Noni (<i>Morinda citrifolia</i>) fruit as a potential anticancer drug.

Docking simulation and ADMET prediction based investigation on the phytochemical constituents of Noni (<i>Morinda citrifolia</i>) fruit as a potential anticancer drug.

Docking simulation and ADMET prediction based investigation on the phytochemical constituents of Noni (Morinda citrifolia) fruit as a potential anticancer drug.

Morinda citrifolia is a traditional plant used in Asian and African countries for its wide nutraceutical and therapeutic effects for the treatment of various ailments. The fruit of M. citrifolia has various biological properties such as anti-bacterial, anti-oxidant, anti-cancer. Using the molecular docking based investigation; we explored around twenty three bioactive phytochemicals in M. citrifolia fruit against human cancer. MAPK6 (mitogen-activated protein kinase 6) was selected as target protein and these twenty three phytochemicals along with a known MAPK6 inhibitor were docked against the target protein. The docking scores of the bioactive phytochemicals against MAPK6 protein range between - 4.5 kcal/mol to - 7.9 kcal/mol and the docking score of the standard drug (CID: 447077) was - 7.3 kcal/mol. Based on the binding affinity five phytochemicals asperuloside (- 6.7 kcal/mol), asperulosidic acid (- 7.2 kcal/mol), deacetylasperulosidic acid (- 7.0 kcal/mol), eugenol (- 6.8 kcal/mol) and rutin (- 7.9 kcal/mol) were chosen for further evaluation. These five compounds were further investigated through RC plot analysis, density function theory and ADMET properties. Stable linkage of protein-ligand interaction was observed through RC plot, density function theory showed the structural stability and reactivity of bioactive compounds through the energy gap between HOMO and LUMO and the ADMET (adsorption, distribution, metabolism, excretion and toxicity) studies showed the safety profile of the bioactive compounds. These in silico results support the utilization of M. citrifolia fruit in the traditional medication and the initiation for the development of new drug against human cancer through in vivo and in vitro evaluation.

Supplementary information: The online version contains supplementary material available at 10.1007/s40203-022-00130-4.

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