A Comparison of Methods to Detect Changes in Prediction Models.

IF 1.3 4区 医学 Q3 COMPUTER SCIENCE, INFORMATION SYSTEMS
Erin M Schnellinger, Wei Yang, Michael O Harhay, Stephen E Kimmel
{"title":"A Comparison of Methods to Detect Changes in Prediction Models.","authors":"Erin M Schnellinger,&nbsp;Wei Yang,&nbsp;Michael O Harhay,&nbsp;Stephen E Kimmel","doi":"10.1055/s-0042-1742672","DOIUrl":null,"url":null,"abstract":"<p><strong>Background: </strong>Prediction models inform decisions in many areas of medicine. Most models are fitted once and then applied to new (future) patients, despite the fact that model coefficients can vary over time due to changes in patients' clinical characteristics and disease risk. However, the optimal method to detect changes in model parameters has not been rigorously assessed.</p><p><strong>Methods: </strong>We simulated data, informed by post-lung transplant mortality data and tested the following two approaches for detecting model change: (1) the \"Direct Approach,\" it compares coefficients of the model refit on recent data to those at baseline; and (2) \"Calibration Regression,\" it fits a logistic regression model of the log-odds of the observed outcomes versus the linear predictor from the baseline model (i.e., the log-odds of the predicted probabilities obtained from the baseline model) and tests whether the intercept and slope differ from 0 and 1, respectively. Four scenarios were simulated using logistic regression for binary outcomes as follows: (1) we fixed all model parameters, (2) we varied the outcome prevalence between 0.1 and 0.2, (3) we varied the coefficient of one of the ten predictors between 0.2 and 0.4, and (4) we varied the outcome prevalence and coefficient of one predictor simultaneously.</p><p><strong>Results: </strong>Calibration regression tended to detect changes sooner than the Direct Approach, with better performance (e.g., larger proportion of true claims). When the sample size was large, both methods performed well. When two parameters changed simultaneously, neither method performed well.</p><p><strong>Conclusion: </strong>Neither change detection method examined here proved optimal under all circumstances. However, our results suggest that if one is interested in detecting a change in overall incidence of an outcome (e.g., intercept), the Calibration Regression method may be superior to the Direct Approach. Conversely, if one is interested in detecting a change in other model covariates (e.g., slope), the Direct Approach may be superior.</p>","PeriodicalId":49822,"journal":{"name":"Methods of Information in Medicine","volume":"61 1-02","pages":"19-28"},"PeriodicalIF":1.3000,"publicationDate":"2022-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10413959/pdf/nihms-1887521.pdf","citationCount":"2","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Methods of Information in Medicine","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.1055/s-0042-1742672","RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"COMPUTER SCIENCE, INFORMATION SYSTEMS","Score":null,"Total":0}
引用次数: 2

Abstract

Background: Prediction models inform decisions in many areas of medicine. Most models are fitted once and then applied to new (future) patients, despite the fact that model coefficients can vary over time due to changes in patients' clinical characteristics and disease risk. However, the optimal method to detect changes in model parameters has not been rigorously assessed.

Methods: We simulated data, informed by post-lung transplant mortality data and tested the following two approaches for detecting model change: (1) the "Direct Approach," it compares coefficients of the model refit on recent data to those at baseline; and (2) "Calibration Regression," it fits a logistic regression model of the log-odds of the observed outcomes versus the linear predictor from the baseline model (i.e., the log-odds of the predicted probabilities obtained from the baseline model) and tests whether the intercept and slope differ from 0 and 1, respectively. Four scenarios were simulated using logistic regression for binary outcomes as follows: (1) we fixed all model parameters, (2) we varied the outcome prevalence between 0.1 and 0.2, (3) we varied the coefficient of one of the ten predictors between 0.2 and 0.4, and (4) we varied the outcome prevalence and coefficient of one predictor simultaneously.

Results: Calibration regression tended to detect changes sooner than the Direct Approach, with better performance (e.g., larger proportion of true claims). When the sample size was large, both methods performed well. When two parameters changed simultaneously, neither method performed well.

Conclusion: Neither change detection method examined here proved optimal under all circumstances. However, our results suggest that if one is interested in detecting a change in overall incidence of an outcome (e.g., intercept), the Calibration Regression method may be superior to the Direct Approach. Conversely, if one is interested in detecting a change in other model covariates (e.g., slope), the Direct Approach may be superior.

Abstract Image

预测模型变化检测方法的比较。
背景:预测模型为许多医学领域的决策提供信息。大多数模型只拟合一次,然后应用于新的(未来的)患者,尽管由于患者临床特征和疾病风险的变化,模型系数可能随着时间的推移而变化。然而,检测模型参数变化的最佳方法尚未得到严格的评估。方法:我们模拟数据,根据肺移植后死亡率数据,并测试了以下两种检测模型变化的方法:(1)“直接方法”,它将最近数据的模型改装系数与基线数据进行比较;和(2)“校准回归”,它拟合观察结果的对数赔率与基线模型的线性预测器的对数赔率的逻辑回归模型(即,从基线模型获得的预测概率的对数赔率),并测试截距和斜率是否分别不同于0和1。采用logistic回归方法对四种情况进行了模拟:(1)固定所有模型参数,(2)将结果患病率在0.1和0.2之间变化,(3)将十个预测因子中的一个的系数在0.2和0.4之间变化,(4)同时改变一个预测因子的结果患病率和系数。结果:校准回归倾向于比直接法更快地检测到变化,具有更好的性能(例如,真实声明的比例更大)。当样本量较大时,两种方法均表现良好。当两个参数同时变化时,两种方法的效果都不好。结论:本文研究的两种变化检测方法在所有情况下都是最优的。然而,我们的结果表明,如果有人对检测结果的总体发生率(例如,截距)的变化感兴趣,则校准回归方法可能优于直接方法。相反,如果对检测其他模型协变量(例如斜率)的变化感兴趣,则直接方法可能更优越。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
Methods of Information in Medicine
Methods of Information in Medicine 医学-计算机:信息系统
CiteScore
3.70
自引率
11.80%
发文量
33
审稿时长
6-12 weeks
期刊介绍: Good medicine and good healthcare demand good information. Since the journal''s founding in 1962, Methods of Information in Medicine has stressed the methodology and scientific fundamentals of organizing, representing and analyzing data, information and knowledge in biomedicine and health care. Covering publications in the fields of biomedical and health informatics, medical biometry, and epidemiology, the journal publishes original papers, reviews, reports, opinion papers, editorials, and letters to the editor. From time to time, the journal publishes articles on particular focus themes as part of a journal''s issue.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信