Interval estimation for operating characteristic of continuous biomarkers with controlled sensitivity or specificity.

IF 16.4 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY
Yijian Huang, Isaac Parakati, Dattatraya H Patil, Martin G Sanda
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引用次数: 0

Abstract

The receiver operating characteristic (ROC) curve provides a comprehensive performance assessment of a continuous biomarker over the full threshold spectrum. Nevertheless, a medical test often dictates to operate at a certain high level of sensitivity or specificity. A diagnostic accuracy metric directly targeting the clinical utility is specificity at the controlled sensitivity level, or vice versa. While the empirical point estimation is readily adopted in practice, the nonparametric interval estimation is challenged by the fact that the variance involves density functions due to estimated threshold. In addition, even with a fixed threshold, many standard confidence intervals including the Wald interval for binomial proportion could have erratic behaviors. In this article, we are motivated by the superior performance of the score interval for binomial proportion and propose a novel extension for the biomarker problem. Meanwhile, we develop exact bootstrap and establish consistency of the bootstrap variance estimator. Both single-biomarker evaluation and two-biomarker comparison are investigated. Extensive simulation studies were conducted, demonstrating competitive performance of our proposals. An illustration with aggressive prostate cancer diagnosis is provided.

对连续生物标记物的操作特征进行区间估计,并控制其灵敏度或特异性。
接收器工作特征曲线(ROC)可对连续生物标记物在整个阈值范围内的性能进行全面评估。然而,医学检验往往需要在一定的高灵敏度或特异性水平上进行操作。直接针对临床效用的诊断准确性指标是受控灵敏度水平下的特异性,反之亦然。虽然在实践中很容易采用经验点估算,但非参数区间估算却面临挑战,因为方差涉及到估算阈值的密度函数。此外,即使阈值固定,许多标准置信区间(包括二项式比例的 Wald 区间)也可能表现不稳定。在本文中,我们从二叉比例得分区间的优越性能出发,提出了一种针对生物标记问题的新扩展方法。同时,我们开发了精确自举法,并建立了自举方差估计器的一致性。我们还研究了单生物标记评价和双生物标记比较。我们进行了广泛的模拟研究,证明了我们的建议具有竞争力。我们还以侵袭性前列腺癌诊断为例进行了说明。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Accounts of Chemical Research
Accounts of Chemical Research 化学-化学综合
CiteScore
31.40
自引率
1.10%
发文量
312
审稿时长
2 months
期刊介绍: Accounts of Chemical Research presents short, concise and critical articles offering easy-to-read overviews of basic research and applications in all areas of chemistry and biochemistry. These short reviews focus on research from the author’s own laboratory and are designed to teach the reader about a research project. In addition, Accounts of Chemical Research publishes commentaries that give an informed opinion on a current research problem. Special Issues online are devoted to a single topic of unusual activity and significance. Accounts of Chemical Research replaces the traditional article abstract with an article "Conspectus." These entries synopsize the research affording the reader a closer look at the content and significance of an article. Through this provision of a more detailed description of the article contents, the Conspectus enhances the article's discoverability by search engines and the exposure for the research.
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