From Genes to Organisms Via the Cell A Problem-Solving Environment for Multicellular Development.

IF 1.8 4区计算机科学 Q3 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS

Computing in Science & Engineering Pub Date : 2007-01-01 DOI:10.1109/MCSE.2007.74

Trevor Cickovski, Kedar Aras, Mark S Alber, Jesus A Izaguirre, Maciej Swat, James A Glazier, Roeland M H Merks, Tilmann Glimm, H George E Hentschel, Stuart A Newman

引用次数: 56

Abstract

To gain performance, developers often build scientific applications in procedural languages, such as C or Fortran, which unfortunately reduces flexibility. To address this imbalance, the authors present CompuCell3D, a multitiered, flexible, and scalable problem-solving environment for morphogenesis simulations that's written in C++ using object-oriented design patterns.

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从基因到细胞的生物体:多细胞发育的问题解决环境。

为了获得性能，开发人员经常使用过程语言(如C或Fortran)构建科学应用程序，不幸的是，这降低了灵活性。为了解决这种不平衡，作者提出了CompuCell3D，这是一个用于形态发生模拟的多层、灵活和可扩展的问题解决环境，使用面向对象的设计模式用c++编写。

本文章由计算机程序翻译，如有差异，请以英文原文为准。

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来源期刊

Computing in Science & Engineering 工程技术-计算机：跨学科应用

CiteScore

4.20

自引率

0.00%

发文量

审稿时长

6-12 weeks

期刊介绍： Physics, medicine, astronomy -- these and other hard sciences share a common need for efficient algorithms, system software, and computer architecture to address large computational problems. And yet, useful advances in computational techniques that could benefit many researchers are rarely shared. To meet that need, Computing in Science & Engineering presents scientific and computational contributions in a clear and accessible format. The computational and data-centric problems faced by scientists and engineers transcend disciplines. There is a need to share knowledge of algorithms, software, and architectures, and to transmit lessons-learned to a broad scientific audience. CiSE is a cross-disciplinary, international publication that meets this need by presenting contributions of high interest and educational value from a variety of fields, including—but not limited to—physics, biology, chemistry, and astronomy. CiSE emphasizes innovative applications in advanced computing, simulation, and analytics, among other cutting-edge techniques. CiSE publishes peer-reviewed research articles, and also runs departments spanning news and analyses, topical reviews, tutorials, case studies, and more.