Biochemical and molecular characterization of some advanced mutant rice (Oryza sativa L.) Genotypes

Md. Kawsar Alam Nadim, M. Mitu, Md. Monirul Islam, Md. Shamiul Haque, S. Alim, S. Akter, M. Mortuza, K. Ahmed
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Abstract

Rice (Oryza sativa L.) is one of the main cereal crops in the world and the main staple food of Bangladesh. Amylose content of rice endosperm is the main chemical properties that contributes the eating and cooking quality. On the other hand, rice protein is the important source of nutrition of almost 50 per cent of the world’s population living on rice. A total of 12 rice genotypes including ten advanced mutant lines, one landrace namely Laxmidigha along with BRRI dhan49 was collected from Plant Breeding Division of Bangladesh Institute of Nuclear Agriculture (BINA), Mymensingh and Bangladesh Rice Research Institute (BRRI), Gazipur. The genotypes were analyzed to assess the amylose and protein content as well as their genetic diversity relationship. Among all the tested genotypes amylose content were ranged from 23.9-20.3% where highest amylose percentage was found for Magic-86 (25.6%). Protein content of the genotypes were ranged from 8.50-5.04%, where highest 8.86% protein was recorded for SSB-3. The highest gene diversity (0.81) was observed in RM519 marker and the lowest (0.28) was in RM111 marker. The PIC values ranged from 0.24-0.78 with a mean of 0.51. The highest Nei’s genetic distance value 0.87 was found in RM-16(N)-10 vs RM-40(C)-4-2-8 and the lowest value 0.18 was found in LD-200-1-3-3-8 vs LD-200-1-3-2-4. A dendogram was constructed using UPGMA system based on Nei’s similarity coefficient and six major clusters were obtained at 0.7 cut off. The genotypes showing diverse ranges of amylose and protein content tended to cluster together in the dendogram with some exceptions. SAARC J. Agric., 20(1): 41-53 (2022)
一些水稻高级突变体的生化和分子特性基因型
水稻(Oryza sativa L.)是世界上主要的谷类作物之一,也是孟加拉国的主要粮食。水稻胚乳中直链淀粉的含量是决定食用和烹饪品质的主要化学性质。另一方面,大米蛋白是世界上近50%以大米为生的人口的重要营养来源。从Mymensingh的孟加拉国核农业研究所(BINA)植物育种处和Gazipur的孟加拉国水稻研究所(BRRI)共收集了12个水稻基因型,包括10个高级突变系、1个地方品种Laxmidigha和BRRI dhan49。通过基因型分析,评价直链淀粉和蛋白质含量及其遗传多样性关系。直链淀粉含量在23.9 ~ 20.3%之间,其中Magic-86直链淀粉含量最高(25.6%)。各基因型的蛋白质含量在8.50 ~ 5.04%之间,其中SSB-3的蛋白质含量最高,为8.86%。基因多样性最高的是RM519(0.81),最低的是RM111(0.28)。PIC值范围为0.24 ~ 0.78,平均值为0.51。RM-16(N)-10和RM-40(C)-4-2-8的Nei遗传距离值最高为0.87,LD-200-1-3-3-8和ld -200- 1-2-3 -4的Nei遗传距离值最低为0.18。采用基于Nei相似系数的UPGMA系统构建树状图,在0.7截断点处得到6个主要聚类。直链淀粉和蛋白质含量不同的基因型在树突图中有聚集在一起的趋势,也有例外。南盟J.农业浙江农业学报,20(1):41-53 (2022)
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