EXPLORING THE POTENTIAL OF Α-ARBUTIN AS THE INHIBITOR OF NEURODEGENERATIVE DISORDERS

Ilija N. Cvijetić, Petar M. Ristivojević, Maja Krstić-Ristivojević, D. Milojković-Opsenica
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Abstract

Tyrosinase is an enzyme involved in generation of dopamine-quinones, which has an important role in oxidative stress associated with the Parkinson’s disease. It is also a common molecular target for the design of novel anti-melanogenic agents. The inhibition of tyrosinase might be responsible for the experimentally observed intracellular antioxidant activity of α-arbutin. Moreover, intrinsic radical scavenging capacity of α-arbutin should also be considered. The binding mode of α-arbutin into the active site of Bacillus megaterium tyrosinase is predicted using AutoDock Vina 1.1. To map the thermodynamic feasibility of HAT and SET-PT mechanisms of the intrinsic antioxidant capacity α-arbutin, bond dissociation enthalpies (BDEs) and ionization potential (IP) are calculated using DFT with B3LYP functional and 6-31+g(d,p) basis set. α-Arbutin fitted well into the active site of tyrosinase, with the calculated binding affinity of -17.5 kcal/mol. The phenolic moiety is located deep into the binding pocket, interacting with His residues around Cu2+ ion. The binding mode of α-arbutin is stabilized via HBD interactions with His231, His42, His60, Arg209, Gly216, and Asn205, HBA interaction with Arg209 at the outer part of active site, and hydrophobic interactions with His208, Val218 and Ala221. The calculated IP of α-arbutin is 175.18 kcal/mol, and BDE of phenolic group is 79.85 kcal/mol. The spin densities of radical-cation and hydroxyl radical are delocalized on the aglycone moiety. The results of this study provide valuable structural insights into the molecular mechanisms of biological action of α-arbutin, and might be exploited for the design of more potent analogues.
探索Α-arbutin作为神经退行性疾病抑制剂的潜力
酪氨酸酶是一种参与多巴胺醌生成的酶,在与帕金森病相关的氧化应激中起重要作用。它也是设计新型抗黑素药物的常见分子靶点。α-熊果苷对酪氨酸酶的抑制作用可能与实验观察到的细胞内抗氧化活性有关。此外,α-熊果苷的内在自由基清除能力也应加以考虑。利用AutoDock Vina 1.1软件预测了α-熊果苷与巨芽孢杆菌酪氨酸酶活性位点的结合方式。为了确定α-熊果苷固有抗氧化能力的HAT和set - pt机制的热力学可行性,采用B3LYP泛函和6-31+g(d,p)基集的DFT计算了键解离焓(BDEs)和电离势(IP)。α-熊果苷与酪氨酸酶的活性位点吻合良好,结合亲和力为-17.5 kcal/mol。酚基部分位于结合袋深处,与Cu2+离子周围的His残基相互作用。α-杨果苷的结合模式是通过HBD与His231、His42、His60、Arg209、Gly216和Asn205的相互作用,HBA与Arg209在活性位点外侧的相互作用,以及与His208、Val218和Ala221的疏水相互作用来稳定的。α-熊果苷的IP为175.18 kcal/mol,酚基的BDE为79.85 kcal/mol。自由基-阳离子和羟基自由基的自旋密度在糖苷元上离域。本研究结果为α-熊果苷生物学作用的分子机制提供了有价值的结构见解,并可用于设计更有效的类似物。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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