{"title":"Detection of PgaABCD Proteins in Biofilm Producing Acinetobacter Baumannii Isolates","authors":"Esraa Eissa Rheama, S. Ibrahim","doi":"10.23851/mjs.v33i5.1320","DOIUrl":null,"url":null,"abstract":"Acinetobacter baumannii is a common cause of nosocomial infections. This bacterium is able to survive in hostile environments (desiccation, antimicrobial therapies, nutrient unavailability) beside colonization biotic and abiotic surfaces and form biofilm in hospitals and long-term care institutions. Biofilm is a three-dimensional structure of a multicellular complex in which the cells are embedded in an Extracellular Polymeric Substance (EPS) that was produced by the organism itself. Biofilm matrix contains proteins, ions, nucleic acids, and polysaccharide polymers. The main factor that leads to biofilm formation in A. baumannii is the creation of the exopolysaccharide poly-1,6-N-acetylglucosamine (PNAG), which is a virulence factor required for adhesion and aggregation by many Gram-negative bacteria. Many studies indicated that PNAG is an important factor to keep the integrity of A. baumannii biofilms in a more dynamic and stressful environment. A cluster of four genes (pgaA, pgaB, pgaC, and pgaD) are responsible for PNAG, which is encoded by pgaABCD locus. Therefore, the aim of this work was to detect proteins encoded by this locus using SDS-PAGE gel in A. baumannii isolates. Using PCR analysis to detect 16S rRNA concluded that all 24 isolates showed a positive amplification with 242bp. Acinetobacter baumannii clinical isolates showed high resistance percentage to ampicillin-sulbactam (AMS) and ceftazidime (CAZ) with 100% and 91% respectively. Furthermore, the isolates showed 83.3% for cefepime (FEP) and 70.8% for amikacin (AK), while the isolates showed a variable resistance percentage toward other antibiotics. By using Congo red method indicated that 66.7% were positive to produce biofilm and 33.3 were non-forming biofilm. Protein sequences alignment showed 99%, 99%, 100% and 99% identity for PgaA, PgaB, PgaC and PgaD respectively with protein GenBank database.","PeriodicalId":7867,"journal":{"name":"Al-Mustansiriyah Journal of Science","volume":"44 1","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2023-02-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"2","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Al-Mustansiriyah Journal of Science","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.23851/mjs.v33i5.1320","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 2
Abstract
Acinetobacter baumannii is a common cause of nosocomial infections. This bacterium is able to survive in hostile environments (desiccation, antimicrobial therapies, nutrient unavailability) beside colonization biotic and abiotic surfaces and form biofilm in hospitals and long-term care institutions. Biofilm is a three-dimensional structure of a multicellular complex in which the cells are embedded in an Extracellular Polymeric Substance (EPS) that was produced by the organism itself. Biofilm matrix contains proteins, ions, nucleic acids, and polysaccharide polymers. The main factor that leads to biofilm formation in A. baumannii is the creation of the exopolysaccharide poly-1,6-N-acetylglucosamine (PNAG), which is a virulence factor required for adhesion and aggregation by many Gram-negative bacteria. Many studies indicated that PNAG is an important factor to keep the integrity of A. baumannii biofilms in a more dynamic and stressful environment. A cluster of four genes (pgaA, pgaB, pgaC, and pgaD) are responsible for PNAG, which is encoded by pgaABCD locus. Therefore, the aim of this work was to detect proteins encoded by this locus using SDS-PAGE gel in A. baumannii isolates. Using PCR analysis to detect 16S rRNA concluded that all 24 isolates showed a positive amplification with 242bp. Acinetobacter baumannii clinical isolates showed high resistance percentage to ampicillin-sulbactam (AMS) and ceftazidime (CAZ) with 100% and 91% respectively. Furthermore, the isolates showed 83.3% for cefepime (FEP) and 70.8% for amikacin (AK), while the isolates showed a variable resistance percentage toward other antibiotics. By using Congo red method indicated that 66.7% were positive to produce biofilm and 33.3 were non-forming biofilm. Protein sequences alignment showed 99%, 99%, 100% and 99% identity for PgaA, PgaB, PgaC and PgaD respectively with protein GenBank database.
鲍曼不动杆菌是医院感染的常见原因。除了定植生物和非生物表面外,这种细菌能够在恶劣环境(干燥、抗微生物治疗、营养缺乏)中存活,并在医院和长期护理机构中形成生物膜。生物膜是一种多细胞复合体的三维结构,其中细胞嵌入由生物体自身产生的细胞外聚合物(EPS)中。生物膜基质含有蛋白质、离子、核酸和多糖聚合物。导致鲍曼不动杆菌生物膜形成的主要因素是胞外多糖聚-1,6- n -乙酰氨基葡萄糖(PNAG)的产生,这是许多革兰氏阴性菌粘附和聚集所需的毒力因子。许多研究表明,PNAG是在动态和压力较大的环境中保持鲍曼不动杆菌生物膜完整性的重要因素。PNAG由pgaABCD位点编码,由pgaA、pgaB、pgaC和pgaad四个基因组成。因此,本工作的目的是利用SDS-PAGE凝胶检测鲍曼不动杆菌分离株中该位点编码的蛋白。采用PCR检测16S rRNA,结果24株均呈242bp的阳性扩增。鲍曼不动杆菌临床分离株对氨苄青霉素-舒巴坦(AMS)和头孢他啶(CAZ)的耐药率分别为100%和91%。此外,菌株对头孢吡肟(FEP)和阿米卡星(AK)的耐药率分别为83.3%和70.8%,对其他抗生素的耐药率各不相同。刚果红法检测结果表明,66.7%的菌株产生生物膜阳性,33.3%的菌株未形成生物膜。与蛋白质GenBank数据库比对,PgaA、PgaB、PgaC和pgaad的同源性分别为99%、99%、100%和99%。