R. Guru, R. Behera, S. Ghosh, A. Bajpayee, J. Panigrahi, A. K. Patel
{"title":"A COMPARATIVE 2D QSAR ANALYSIS OF LEVETIRACETAM& ITS ANALOGS:-THE INHIBITOR OF GLIOBLASTOMA, BY DIFFERENT STATISTICAL TECHNIQUES: MLR, PLS, SVM, ANN","authors":"R. Guru, R. Behera, S. Ghosh, A. Bajpayee, J. Panigrahi, A. K. Patel","doi":"10.1234/JGPT.V3I4.372","DOIUrl":null,"url":null,"abstract":"Levetiracetam is a Antiepileptic drugs (AEDs) that act as an inhibitor of Glioblastoma. AEDs may have an impact in modulating O(6)-methylguanine-DNA methyltransferase (MGMT), a DNA repair protein that has an important role in tumour cell resistance to alkylating agents. Levetiracetam (LEV) is the most potent MGMT inhibitor among several AEDs with diverse MGMT regulatory actions. A QSAR study has been performed by taking 64 analogs of Levetiracetam. Various 2D Constitutional, Geometrical and Chemical Feature Distance Matrix (CFDM) descriptors were generated by using Molegro Data Modeller V2.5.0 tool. The consequence was calculated for each type of descriptors by taking the Andrews coefficient as dependent variable. Multiple regression analysis was performed by Minitab 16 tool. Good correlation R-sq value 0.93 was obtained from the CFDM descriptors in comparison to 2D Constitutional, Geometrical descriptor calculation. The results were also further verified by using PLS (Partial Least Square), SVM (Support vector machines) and ANN (artificial neural networks) based calculation. The results obtained were consistent with ANN statistics and the ANN based method show R-sq value as 0.93 in case of CFDM descriptor which was observed to be the highest among above three methods of analysis. The results obtained with these models suggest, for this particular drug CFDM descriptors modulates strongly the activity rather than 2D Constitutional & Geometrical Descriptor.","PeriodicalId":15889,"journal":{"name":"Journal of Global Pharma Technology","volume":"13 1","pages":"1-13"},"PeriodicalIF":0.0000,"publicationDate":"2011-05-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Global Pharma Technology","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1234/JGPT.V3I4.372","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
Abstract
Levetiracetam is a Antiepileptic drugs (AEDs) that act as an inhibitor of Glioblastoma. AEDs may have an impact in modulating O(6)-methylguanine-DNA methyltransferase (MGMT), a DNA repair protein that has an important role in tumour cell resistance to alkylating agents. Levetiracetam (LEV) is the most potent MGMT inhibitor among several AEDs with diverse MGMT regulatory actions. A QSAR study has been performed by taking 64 analogs of Levetiracetam. Various 2D Constitutional, Geometrical and Chemical Feature Distance Matrix (CFDM) descriptors were generated by using Molegro Data Modeller V2.5.0 tool. The consequence was calculated for each type of descriptors by taking the Andrews coefficient as dependent variable. Multiple regression analysis was performed by Minitab 16 tool. Good correlation R-sq value 0.93 was obtained from the CFDM descriptors in comparison to 2D Constitutional, Geometrical descriptor calculation. The results were also further verified by using PLS (Partial Least Square), SVM (Support vector machines) and ANN (artificial neural networks) based calculation. The results obtained were consistent with ANN statistics and the ANN based method show R-sq value as 0.93 in case of CFDM descriptor which was observed to be the highest among above three methods of analysis. The results obtained with these models suggest, for this particular drug CFDM descriptors modulates strongly the activity rather than 2D Constitutional & Geometrical Descriptor.
左乙拉西坦是一种抗癫痫药物,可作为胶质母细胞瘤的抑制剂。AEDs可能对O(6)-甲基鸟嘌呤-DNA甲基转移酶(MGMT)的调节有影响,MGMT是一种DNA修复蛋白,在肿瘤细胞对烷基化剂的抗性中起重要作用。左乙拉西坦(LEV)是几种具有不同MGMT调节作用的AEDs中最有效的MGMT抑制剂。通过服用64种左乙拉西坦类似物进行了QSAR研究。利用Molegro Data modeler V2.5.0工具生成各种二维结构、几何和化学特征距离矩阵(CFDM)描述符。以安德鲁斯系数为因变量,计算各类型描述符的结果。采用Minitab 16工具进行多元回归分析。CFDM描述符与二维构造、几何描述符计算结果的相关性R-sq值为0.93。利用偏最小二乘法(PLS)、支持向量机(SVM)和人工神经网络(ANN)对结果进行了进一步验证。所得结果与人工神经网络统计结果一致,基于人工神经网络的方法在CFDM描述符上的R-sq值为0.93,在以上三种分析方法中最高。这些模型的结果表明,对于这种特殊的药物,CFDM描述符比2D结构和几何描述符更能调节活性。