Helping scientists reconnect their datasets

Abdussalam Alawini, D. Maier, K. Tufte, Bill Howe
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引用次数: 13

Abstract

It seems inevitable that the datasets associated with a research project proliferate over time: collaborators may extend datasets with new measurements and new attributes, new experimental runs result in new files with similar structures, and subsets of data are extracted for independent analysis. As these "residual" datasets begin to accrete over time, scientists can lose track of the derivation history that connects them, complicating data sharing, provenance tracking, and scientific reproducibility. In this paper, focusing on data in spreadsheets, we consider how observable relationships between two datasets can help scientists recall their original derivation connection. For instance, if dataset A is wholly contained in dataset B, B may be a more recent version of A and should be preferred when archiving or publishing. We articulate a space of relevant relationships, develop a set of algorithms for efficient discovery of these relationships, and organize these algorithms into a new system called ReConnect to assist scientists in relationship discovery. Our evaluation shows that existing approaches that rely on flagging differences between two spreadsheets are impractical for many relationship-discovery tasks, and a user study shows that ReConnect can improve scientists' ability to detect useful relationships and subsequently identify the best dataset for a given task.
帮助科学家重新连接他们的数据集
随着时间的推移,与研究项目相关的数据集似乎不可避免地会激增:合作者可能会用新的测量方法和新的属性扩展数据集,新的实验运行会产生具有相似结构的新文件,并且提取数据子集用于独立分析。随着时间的推移,这些“残余”数据集开始增加,科学家们可能会失去连接它们的衍生历史,使数据共享、来源跟踪和科学可重复性变得复杂。在本文中,我们关注电子表格中的数据,考虑两个数据集之间的可观察关系如何帮助科学家回忆它们最初的推导联系。例如,如果数据集A完全包含在数据集B中,则B可能是A的最新版本,在归档或发布时应优先选择B。我们明确了相关关系的空间,开发了一套有效发现这些关系的算法,并将这些算法组织到一个名为ReConnect的新系统中,以帮助科学家发现关系。我们的评估表明,现有的依赖于标记两个电子表格之间差异的方法对于许多关系发现任务是不切实际的,一项用户研究表明,ReConnect可以提高科学家检测有用关系的能力,并随后为给定任务确定最佳数据集。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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