Making United States Integrated Ocean Observing System (U.S. IOOS) inclusive of marine biological resources

H. Moustahfid, J. Potemra, P. Goldstein, R. Mendelssohn, A. DesRochers
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Abstract

An important Data Management and Communication (DMAC) goal is to enable a multi-disciplinary view of the ocean environment by facilitating discovery and integration of data from various sources, projects and scientific domains. United States Integrated Ocean Observing System (U.S. IOOS) DMAC functional requirements are based upon guidelines for standardized data access services, data formats, metadata, controlled vocabularies, and other conventions. So far, the data integration effort has focused on geophysical U.S. IOOS core variables such as temperature, salinity, ocean currents, etc. The IOOS Biological Observations Project is addressing the DMAC requirements that pertain to biological observations standards and interoperability applicable to U.S. IOOS and to various observing systems. Biological observations are highly heterogeneous and the variety of formats, logical structures, and sampling methods create significant challenges. Here we describe an informatics framework for biological observing data (e.g. species presence/absence and abundance data) that will expand information content and reconcile standards for the representation and integration of these biological observations for users to maximize the value of these observing data. We further propose that the approach described can be applied to other datasets generated in scientific observing surveys and will provide a vehicle for wider dissemination of biological observing data. We propose to employ data definition conventions that are well understood in U.S. IOOS and to combine these with ratified terminologies, policies and guidelines.
使美国综合海洋观测系统(U.S. IOOS)包括海洋生物资源
数据管理和通信(DMAC)的一个重要目标是通过促进发现和整合来自各种来源、项目和科学领域的数据,实现海洋环境的多学科视图。美国综合海洋观测系统(U.S. IOOS) DMAC功能需求是基于标准化数据访问服务、数据格式、元数据、受控词汇表和其他约定的指导方针。到目前为止,数据整合工作主要集中在美国IOOS核心的地球物理变量上,如温度、盐度、洋流等。IOOS生物观测项目正在解决与适用于美国IOOS和各种观测系统的生物观测标准和互操作性有关的DMAC要求。生物观察是高度异质性的,各种格式、逻辑结构和采样方法带来了重大挑战。在这里,我们描述了一个生物观测数据(例如物种存在/缺失和丰度数据)的信息学框架,该框架将扩展信息内容,并协调这些生物观测数据的表示和集成标准,以使用户最大化这些观测数据的价值。我们进一步提出,所描述的方法可以应用于科学观测调查产生的其他数据集,并将为生物观测数据的更广泛传播提供一种工具。我们建议采用美国IOOS中易于理解的数据定义约定,并将其与已批准的术语、政策和指导方针结合起来。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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