Multi Epitope Peptide Vaccine against Human Parvovirus B19 Using Immuno-Informatics Approaches

Nisreen Osman Mohammed, K. A. Abd-elrahman, Yassir A. Almofti
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引用次数: 2

Abstract

Introduction: Human parvovirus B19 (B19V) is small non-enveloped, single-stranded DNA virus belong to genus Erythrovirus. B19V can cause erythema infectiosum (fifth disease), oligoarthritis, hydrops fetalis and a plastic crisis in patients with sickle cell anemia. A variety of vaccine strategies have been employed targeting immune responses. However their results were controversy with a limiting in availability of viral antigen. Since B19V replicates predominantly in erythroid progenitor cells of human bone marrow, this makes a peptide-based vaccines a promising strategy for development of vaccine against B19V with less allergenic and reactogenic responses. The aim of the present study was to design an efficient multi-epitope vaccine for human B19 virus using VP1 glycoprotein. Material and method: Thirty six sequences of VP1 glycoprotein were retrieved from NCBI database in December 2017 and aligned to determine the conservancy between the retrieved strains. The IEDB different analysis resources were used to predict epitopes that could act as promising peptides vaccine against parvovirus B19. The predicted epitopes were further assessed for population coverage against the whole world population. Results: The epitopes 214-PEVP-217, 675-GLHQPPP-681 and 554-SLRPGPVSQPYH-565 were found to be the most potential epitopes against B cells. For the T cell three epitopes namely 155-FRYSQLAKL-163, 302-CTISPIMGY-310 and 316-YLDFNALNL-324 showed high affinity to MHC-I alleles. The epitopes (core) 155-FRYSQLAKL-163, 438-FYVLEHSSF-446 and 404-WVYFPPQYA-412 showed high affinity to interact with MHC-II alleles. 155-FRYSQLAKL-163 and 438-FYVLEHSSF-446 showed high coverage for whole world population with percentage of 99.73% and 94.85% respectively. Conclusion: This study proposed eight epitopes for B and T cells that could be a powerful multi epitope vaccine against B19V. Particular concern directed towards the epitope 155-FRYSQLAKL-163 which demonstrated merits by reacting efficiently with both MHC-I and MHC-II alleles. Clinical trial is required to proof the efficacy of these epitopes as promising candidate vaccine against parvovirus B19.
基于免疫信息学方法的人细小病毒B19多表位肽疫苗
人细小病毒B19 (B19V)是红病毒属的一种非包膜单链DNA小病毒。B19V可引起传染性红斑(第五种疾病)、少关节炎、胎儿水肿和镰状细胞性贫血患者的可塑性危象。针对免疫反应采用了多种疫苗策略。然而,由于病毒抗原的可用性有限,其结果存在争议。由于B19V主要在人骨髓的红系祖细胞中复制,这使得基于肽的疫苗成为开发抗B19V疫苗的一个有希望的策略,具有较少的致敏性和反应性反应。本研究的目的是利用VP1糖蛋白设计一种高效的人B19病毒多表位疫苗。材料与方法:于2017年12月从NCBI数据库中检索到36个VP1糖蛋白序列,并进行比对,确定所检索菌株之间的相关性。利用IEDB不同的分析资源来预测可能作为细小病毒B19多肽疫苗的表位。对预测的表位进行了进一步的全球人口覆盖率评估。结果:214-PEVP-217、675-GLHQPPP-681和554-SLRPGPVSQPYH-565是抗B细胞最有潜力的表位。对于T细胞,155-FRYSQLAKL-163、302-CTISPIMGY-310和316- yldfnall -324三个表位与MHC-I等位基因具有高亲和力。表位(核心)155-FRYSQLAKL-163、438-FYVLEHSSF-446和404-WVYFPPQYA-412与MHC-II等位基因表现出高亲和力。155-FRYSQLAKL-163和438-FYVLEHSSF-446对全球人口的覆盖率分别为99.73%和94.85%。结论:本研究为B细胞和T细胞提供了8个抗原表位,可作为抗B19V的强效多抗原表位疫苗。特别关注的是表位155-FRYSQLAKL-163,它通过与MHC-I和MHC-II等位基因有效反应而显示出优点。需要临床试验来证明这些表位作为细小病毒B19候选疫苗的有效性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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