How Many Costly Simulations Do we Need to Create Accurate Metamodels? A Case Study on Predicting HIV Viral Load in Response to Clinically Relevant Intervention Scenarios

Christopher B. Lutz, P. Giabbanelli, Andrew Fisher, Vijay K. Mago
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引用次数: 1

Abstract

Computer simulations are used in precision medicine to assist in adapting treatment plans for varying patient characteristics, especially for diseases like HIV where these characteristics have a major impact on disease trajectory. However, simulations are computationally intensive, which can be prohibitive at scale. Meta-models for HIV progression have been developed previously to approximate these simulation results more efficiently, but we are interested in determining how much data is required to build an accurate meta-model. Using many different amounts of data from two HIV simulation models, we build machine learning classification meta-models to predict if an HIV patient is at risk for AIDS based on treatment parameters. Our findings indicate that the amount required to achieve high meta-model accuracy varies for different computer simulations. We are able to achieve near-perfect accuracy with one of our models using limited data, while the other model requires more extensive data to achieve stable accuracy.
我们需要多少昂贵的模拟来创建准确的元模型?在临床相关干预方案下预测HIV病毒载量的案例研究
计算机模拟在精准医疗中被用于帮助调整治疗计划,以适应不同的患者特征,特别是对于像艾滋病这样的疾病,这些特征对疾病轨迹有重大影响。然而,模拟是计算密集型的,这在规模上可能是令人望而却步的。为了更有效地近似这些模拟结果,之前已经开发了HIV进展的元模型,但我们感兴趣的是确定需要多少数据来建立一个准确的元模型。使用来自两个HIV模拟模型的许多不同数量的数据,我们建立了机器学习分类元模型,以基于治疗参数预测HIV患者是否有患艾滋病的风险。我们的研究结果表明,实现高元模型精度所需的量因不同的计算机模拟而异。我们能够用一个模型使用有限的数据实现近乎完美的精度,而另一个模型需要更广泛的数据来实现稳定的精度。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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