The complete chloroplast genome of Atriplex gmelinii C. A. Mey. ex Bong. (Amaranthaceae).

IF 1.6 1区哲学 0 PHILOSOPHY

Philosophical Perspectives Pub Date : 2022-03-25 eCollection Date: 2022-01-01 DOI:10.1080/23802359.2022.2055501

Jongsun Park, Yongsung Kim, Juhyeon Min, Sang-Tae Kim

引用次数: 0

Abstract

Atriplex gmelinii C. A. Mey. Ex Bong._1838 is an annual halophytic herb found in East Asia and North America. The chloroplast genome of A. gmelinii was successfully sequenced. The assembled genome (151,852 bp; GC ratio, 37.3%) is composed of four subregions, with the large single copy (LSC; 83,872 bp; 35.4%) and small single copy (SSC; 17,812 bp; 30.9%) regions separated by two regions of inverted repeat regions (25,084 bp; 42.8%). A total of 130 genes were predicted with 85 protein-coding genes, 8 rRNAs, and 37 tRNAs. The phylogenetic analyses inferred from whole chloroplast genomes of 35 species, including 34 species in Amaranthaceae and one outgroup species, suggest a close relationship between A. gmelinii and A. centralasiatica.

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Atriplex gmelinii C. A. Mey.A. Mey.(苋科）。

Atriplex gmelinii C. A. Mey.A. Mey.Ex Bong._1838）是一种生长在东亚和北美的一年生卤代草本植物。gmelinii 的叶绿体基因组已成功测序。组装的基因组（151,852 bp；GC 比率，37.3%）由四个亚区组成，其中大单拷贝区（LSC；83,872 bp；35.4%）和小单拷贝区（SSC；17,812 bp；30.9%）被两个反向重复区（25,084 bp；42.8%）隔开。共预测出 130 个基因，其中包括 85 个蛋白质编码基因、8 个 rRNA 和 37 个 tRNA。从 35 个物种（包括 34 个苋科物种和 1 个外群物种）的全叶绿体基因组推断的系统发生分析表明，A. gmelinii 与 A. centralasiatica 关系密切。

本文章由计算机程序翻译，如有差异，请以英文原文为准。

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来源期刊

Philosophical Perspectives PHILOSOPHY-

CiteScore

1.50

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0.00%

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