Attention-Guided Version of 2D UNet for Automatic Brain Tumor Segmentation

Mehrdad Noori, Ali Bahri, K. Mohammadi
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引用次数: 68

Abstract

Gliomas are the most common and aggressive among brain tumors, which cause a short life expectancy in their highest grade. Therefore, treatment assessment is a key stage to enhance the quality of the patients’ lives. Recently, deep convolutional neural networks (DCNNs) have achieved a remarkable performance in brain tumor segmentation, but this task is still difficult owing to high varying intensity and appearance of gliomas. Most of the existing methods, especially UNet-based networks, integrate low-level and high-level features in a naive way, which may result in confusion for the model. Moreover, most approaches employ 3D architectures to benefit from 3D contextual information of input images. These architectures contain more parameters and computational complexity than 2D architectures. On the other hand, using 2D models causes not to benefit from 3D contextual information of input images. In order to address the mentioned issues, we design a low-parameter network based on 2D UNet in which we employ two techniques. The first technique is an attention mechanism, which is adopted after concatenation of low-level and high-level features. This technique prevents confusion for the model by weighting each of the channels adaptively. The second technique is the Multi-View Fusion. By adopting this technique, we can benefit from 3D contextual information of input images despite using a 2D model. Experimental results demonstrate that our method performs favorably against 2017 and 2018 state-of-the-art methods.
二维UNet的注意引导版自动脑肿瘤分割
胶质瘤是脑肿瘤中最常见和最具侵袭性的,其最高级别的预期寿命较短。因此,治疗评估是提高患者生活质量的关键环节。近年来,深度卷积神经网络(deep convolutional neural networks, DCNNs)在脑肿瘤分割方面取得了显著的成绩,但由于胶质瘤的高变化强度和外观特征,这项任务仍然很困难。现有的大多数方法,特别是基于unet的网络,以一种幼稚的方式集成了低级和高级特征,这可能会导致模型的混乱。此外,大多数方法采用3D架构来受益于输入图像的3D上下文信息。这些体系结构比二维体系结构包含更多的参数和计算复杂度。另一方面,使用2D模型导致不能从输入图像的3D上下文信息中获益。为了解决上述问题,我们设计了一个基于2D UNet的低参数网络,其中我们采用了两种技术。第一种技术是注意机制,它是在低级和高级特征连接之后采用的。这种技术通过自适应地加权每个通道来防止模型混淆。第二种技术是多视图融合。通过采用这种技术,我们可以从输入图像的3D上下文信息中获益,尽管使用的是2D模型。实验结果表明,与2017年和2018年最先进的方法相比,我们的方法表现良好。
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