Outcomes of the multicenter monitoring of the causative agent of invasive listeriosis in the metropolis

O. Voronina, N. Ryzhova, M. Kunda, E. Aksenova, Tatiana I. Karpova, A. Melkumyan, Elena A. Klimova, G. Karetkina, E.A. Posukhovsky, O. Gruzdeva, I. Tartakovsky
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Abstract

Introduction. Invasive listeriosis is a rare disease posing a threat to high-risk groups and often leading to a fatal outcome. Its causative agent is Listeria monocytogenes, a ubiquitous saprophyte that has turned into an important foodborne pathogen with the growing industry of semi-cooked and ready-to-eat products. The aim of the study is the characterization of L. monocytogenes isolates in the Moscow region and identification of possible causes of susceptibility to infection Materials and methods. The multicenter monitoring of L. monocytogenes was conducted in the Moscow metropolitan area, using bacteriological and genomic methods for description of the pathogen, medical history collection and detailed analysis of patient case summaries. Results. In the cohorts of patients with perinatal listeriosis (PL) and meningitis-septicemia (MS), invasive listeriosis had a year-round occurrence with slight upswings in MarchApril and JulyNovember. During the COVID-19 pandemic, in the MS group, the minimum age of patients decreased to 31 years and the proportion of deaths increased 1.57-fold compared to 20182019. During the pandemic, an increase in the diversity of L. monocytogenes genotypes was observed, along with changes in the spectrum of pathogen genotypes throughout the pandemic stages. During the monitoring, a total of 73 L. monocytogenes clinical isolates belonging to 24 genotypes were described. Seven genotypes belonged to the first phylogenetic lineage (PLI); 14 genotypes belonged to PLII. The PL cohort had the highest proportion of PLI genotypes (52%). In the MS cohort, the group of men had the widest diversity of genotypes, 6 of which were identical to genotypes of food isolates. In the analysed set of isolates, 12 new profiles of internalin genes were identified and described. The whole genome sequencing detected the presence of plasmids in 9 of 58 genomes of clinical isolates. The comparison of core genomes revealed an epidemic relationship between isolates of the same genotype for ST4, ST21, and ST425. Conclusion. The performed study presents a detailed description of the diversity and virulence of L. monocytogenes circulating in the Moscow metropolitan area, thus providing information for timely diagnosis and treatment of invasive listeriosis.
大城市侵袭性李斯特菌病原多中心监测结果分析
介绍。侵袭性李斯特菌病是一种罕见的疾病,对高危人群构成威胁,往往导致致命的后果。它的病原体是单核细胞增生李斯特菌,这是一种无处不在的腐生菌,随着半熟和即食食品行业的发展,它已成为一种重要的食源性病原体。本研究的目的是鉴定莫斯科地区单核细胞增生乳杆菌分离株的特征,并确定可能的感染敏感性原因。采用细菌学和基因组学方法对莫斯科大都市区单核细胞增生乳杆菌进行多中心监测,对病原菌进行描述,收集病史,详细分析患者病例摘要。结果。在围产期李斯特菌病(PL)和脑膜炎-败血症(MS)患者队列中,侵袭性李斯特菌病全年都有发生,在3 - 4月和7 - 11月略有上升。在2019冠状病毒病大流行期间,MS组患者的最低年龄降至31岁,死亡比例比2018 - 2019年增加了1.57倍。在大流行期间,观察到单核细胞增生乳杆菌基因型多样性的增加,以及在整个大流行阶段病原体基因型谱的变化。在监测过程中,共分离到73株单核细胞增生乳杆菌,分24个基因型。7个基因型均属于第一系统发育谱系(PLI);14个基因型属于PLII。PL队列中PLI基因型比例最高(52%)。在MS队列中,男性群体具有最广泛的基因型多样性,其中6种与食物分离株的基因型相同。在分析的分离物中,鉴定和描述了12个新的内部基因谱。全基因组测序检测到临床分离株58个基因组中有9个存在质粒。核心基因组的比较显示,ST4、ST21和ST425具有相同基因型的分离株之间存在流行关系。结论。本研究详细描述了莫斯科大都市区流行的单核增生乳杆菌的多样性和毒力,从而为侵袭性李斯特菌病的及时诊断和治疗提供信息。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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