Discovering Similarity Across Heterogeneous Features: A Case Study of Clinico-Genomic Analysis

Abstract

The analysis of both continuous and categorical attributes generating a heterogeneous mix of attributes poses challenges in data clustering. Traditional clustering techniques like k-means clustering work well when applied to small homogeneous datasets. However, as the data size becomes large, it becomes increasingly difficult to find meaningful and well-formed clusters. In this paper, the authors propose an approach that utilizes a combined similarity function, which looks at similarity across numeric and categorical features and employs this function in a clustering algorithm to identify similarity between data objects. The findings indicate that the proposed approach handles heterogeneous data better by forming well-separated clusters.