Improving performance and transferability of small mammal species distribution models

IF 0.8 4区 综合性期刊 Q3 MULTIDISCIPLINARY SCIENCES
Nerissa A. Haby, S. Delean, B. Brook
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引用次数: 0

Abstract

ABSTRACT In theory, interpretation and transferability of species distribution models (SDMs) should be improved by including abiotic and biotic factors that directly influence a species’ fundamental niche. We investigated whether adding topographic, soil and vegetation variables to a climate-only model improved model performance and predictive capacity for four coastal small mammal species. Adding landscape variables improved the structural goodness of fit for all four species (e.g. 2.6–47.6% increase in deviance explained), and the information-theoretic rankings (based on AICc, BIC and DIC) for the wet-heath specialist (Muridae, Rattus lutreolus lutreolus) and peramelid (Peramelidae, Isoodon obesulus obesulus). For the latter species, improved model performance successfully coincided with improved predictive capacity in the out-of-region validation (increase in the area under the curve, AUC). However, this result was poorly supported by trends in the successful classification of absences (specificity) indicating a modelling bias caused by low prevalence of species occurrence. Across all SDMs, additional abiotic and biotic landscape variables contributed between 3.7 and 14.9% of accumulative deviance explained. Our results illustrate increased model fit and transferability for select species, highlighting the potential for landscape variables that represent resources to better represent the fundamental niche in SDMs.
改进小型哺乳动物物种分布模型的性能和可移植性
从理论上讲,物种分布模型(SDMs)的解释和可转移性应该通过纳入直接影响物种基本生态位的非生物因子和生物因子来提高。我们研究了在气候模型中加入地形、土壤和植被变量是否能提高四种沿海小型哺乳动物的模型性能和预测能力。添加景观变量提高了所有4个物种的结构拟合优度(偏差解释增加2.6-47.6%),并提高了湿卫生专家(鼠科、鼠尾鼠)和Peramelidae (Peramelidae、Isoodon obesulus obesulus)的信息论排名(基于AICc、BIC和DIC)。对于后者,模型性能的提高成功地与区域外验证的预测能力的提高相吻合(曲线下面积,AUC的增加)。然而,这一结果没有得到成功分类(特异性)趋势的支持,这表明由于物种发生率低而导致的建模偏差。在所有sdm中,额外的非生物和生物景观变量对累计偏差的贡献率在3.7至14.9%之间。我们的研究结果表明,选择物种的模型拟合和可转移性增加,突出了代表资源的景观变量的潜力,以更好地代表SDMs的基本生态位。
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来源期刊
CiteScore
1.40
自引率
12.50%
发文量
17
审稿时长
>12 weeks
期刊介绍: Published since 1880, the Transactions of the Royal Society of South Australia is a multidisciplinary journal that aims to publish high quality, peer-reviewed papers of particular relevance to Australasia. There is a particular focus on natural history topics such as: botany, zoology, geology, geomorphology, palaeontology, meteorology, geophysics, biophysics, soil science and environmental science, and environmental health. However, the journal is not restricted to these fields, with papers concerning epidemiology, ethnology, anthropology, linguistics, and the history of science and exploration also welcomed. Submissions are welcome from all authors, and membership of the Royal Society of South Australia is not required. The following types of manuscripts are welcome: Reviews, Original Research Papers, History of Science and Exploration, Brief Communications, Obituaries.
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