A matter of trust: Learning lessons about causality will make qAOPs credible

IF 3.1 Q2 TOXICOLOGY
Nicoleta Spînu , Mark T.D. Cronin , Judith C. Madden , Andrew P. Worth
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引用次数: 3

Abstract

Toxicology in the 21st Century has seen a shift from chemical risk assessment based on traditional animal tests, identifying apical endpoints and doses that are “safe”, to the prospect of Next Generation Risk Assessment based on non-animal methods. Increasingly, large and high throughput in vitro datasets are being generated and exploited to develop computational models. This is accompanied by an increased use of machine learning approaches in the model building process. A potential problem, however, is that such models, while robust and predictive, may still lack credibility from the perspective of the end-user. In this commentary, we argue that the science of causal inference and reasoning, as proposed by Judea Pearl, will facilitate the development, use and acceptance of quantitative AOP models. Our hope is that by importing established concepts of causality from outside the field of toxicology, we can be “constructively disruptive” to the current toxicological paradigm, using the “Causal Revolution” to bring about a “Toxicological Revolution” more rapidly.

信任问题:了解因果关系将使质量保证计划可信
21世纪的毒理学已经从基于传统动物试验的化学品风险评估(确定“安全”的顶点和剂量)转向基于非动物方法的下一代风险评估。越来越多的大型和高通量的体外数据集被生成并用于开发计算模型。这伴随着在模型构建过程中越来越多地使用机器学习方法。然而,一个潜在的问题是,这些模型虽然稳健且具有预测性,但从最终用户的角度来看,可能仍然缺乏可信度。在这篇评论中,我们认为由Judea Pearl提出的因果推理和推理科学将促进定量AOP模型的开发、使用和接受。我们的希望是,通过从毒理学领域之外引入既定的因果关系概念,我们可以“建设性地破坏”当前的毒理学范式,利用“因果革命”更快地带来“毒理学革命”。
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来源期刊
Computational Toxicology
Computational Toxicology Computer Science-Computer Science Applications
CiteScore
5.50
自引率
0.00%
发文量
53
审稿时长
56 days
期刊介绍: Computational Toxicology is an international journal publishing computational approaches that assist in the toxicological evaluation of new and existing chemical substances assisting in their safety assessment. -All effects relating to human health and environmental toxicity and fate -Prediction of toxicity, metabolism, fate and physico-chemical properties -The development of models from read-across, (Q)SARs, PBPK, QIVIVE, Multi-Scale Models -Big Data in toxicology: integration, management, analysis -Implementation of models through AOPs, IATA, TTC -Regulatory acceptance of models: evaluation, verification and validation -From metals, to small organic molecules to nanoparticles -Pharmaceuticals, pesticides, foods, cosmetics, fine chemicals -Bringing together the views of industry, regulators, academia, NGOs
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