Impact of PETase’s Active Site Disulfide Bond on PET Biodegradation

Fine focus Pub Date : 2022-07-18 DOI:10.33043/ff.8.1.86-99
K. Saha, C. Gedney
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Abstract

Plastic pollution is one of the largest problems globally, with polyethylene terephthalate (PET) plastic as one of the main sources. Effective depolymerization of PET to its monomers for upcycling is a challenge. PETase is reported to be an effective enzyme for biodegradation of PET via C-O bond cleavage of ester linkage. The role of the disulfide bond, present in PETase’s active site sequence, is unknown in the cleavage of PET’s ester linkage. To understand the role of this bond, two separate versions of PETase – one containing the disulfide bond, and the other without the disulfide bond - were modeled using PyMol™, synthesized, and tested for degradation of PET surrogate compound, bis (2-hydroxyethyl) terephthalate (BHET). Several experiments were performed in the presence and absence of phenylmethylsulfonyl fluoride (PMSF), a serine protease. The results reveal that the role of the disulfide bond in the degradation of BHET’s ester linkage is insignificant and the variation in the results (ethylene glycol yields, BHET degradation per microgram of enzyme) are within the experimental uncertainty. This finding is a stepping-stone to further modifying PETase and improving its activity towards commercial adaption of this technology for PET upcycling and creating a circular carbon economy, improving the world’s carbon footprint, and mitigating ocean and environmental plastic pollution.
PET酶活性位点二硫键对PET生物降解的影响
塑料污染是全球最大的问题之一,聚对苯二甲酸乙二醇酯(PET)塑料是主要污染源之一。有效解聚PET为其单体的升级回收是一个挑战。据报道,PET酶是一种通过C-O键裂解酯链来降解PET的有效酶。二硫键的作用,存在于PET酶的活性位点序列,在PET的酯键的切割是未知的。为了了解这个键的作用,使用PyMol™对两个不同版本的PETase进行建模,一个含有二硫键,另一个不含二硫键,合成并测试PET替代化合物,双(2-羟乙基)对苯二甲酸乙二醇酯(BHET)的降解。在存在和不存在苯基甲基磺酰氟(PMSF)的情况下进行了几项实验,PMSF是一种丝氨酸蛋白酶。结果表明,二硫键在BHET酯链降解中的作用不显著,结果的变化(乙二醇产率、每微克酶对BHET的降解)在实验不确定度范围内。这一发现是进一步改进PETase并改善其活性的垫脚石,该技术将用于PET升级回收,创造循环碳经济,改善世界碳足迹,减轻海洋和环境塑料污染。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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