A simple recipe for setting up the flux equations of cyclic and linear reaction schemes of ion transport with a high number of states: The arrow scheme

IF 3.3 3区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY
U. Hansen, O. Rauh, I. Schroeder
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引用次数: 3

Abstract

abstract The calculation of flux equations or current-voltage relationships in reaction kinetic models with a high number of states can be very cumbersome. Here, a recipe based on an arrow scheme is presented, which yields a straightforward access to the minimum form of the flux equations and the occupation probability of the involved states in cyclic and linear reaction schemes. This is extremely simple for cyclic schemes without branches. If branches are involved, the effort of setting up the equations is a little bit higher. However, also here a straightforward recipe making use of so-called reserve factors is provided for implementing the branches into the cyclic scheme, thus enabling also a simple treatment of such cases.
建立高态离子输运循环和线性反应格式通量方程的简单方法:箭头格式
在具有大量状态的反应动力学模型中,通量方程或电流-电压关系的计算可能非常麻烦。本文提出了一种基于箭头格式的配方,它可以直接获得循环和线性反应格式中通量方程的最小形式和所涉及状态的占据概率。这对于没有分支的循环方案来说非常简单。如果涉及到分支,建立方程的难度就会大一些。然而,这里也提供了一个利用所谓的储备因子来实现循环方案中的分支的简单方法,从而也能够简单地处理这种情况。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Channels
Channels 生物-生化与分子生物学
CiteScore
5.90
自引率
0.00%
发文量
21
审稿时长
6-12 weeks
期刊介绍: Channels is an open access journal for all aspects of ion channel research. The journal publishes high quality papers that shed new light on ion channel and ion transporter/exchanger function, structure, biophysics, pharmacology, and regulation in health and disease. Channels welcomes interdisciplinary approaches that address ion channel physiology in areas such as neuroscience, cardiovascular sciences, cancer research, endocrinology, and gastroenterology. Our aim is to foster communication among the ion channel and transporter communities and facilitate the advancement of the field.
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