FURTHER STUDY ON TWO SPECIES OF LOACH FISHES (Cypriniformes: Nemacheilidae: Nemacheilus) BASED ON MORPHOLOGY AND MOLECULAR DATA

Q3 Agricultural and Biological Sciences
D. Rahayu
{"title":"FURTHER STUDY ON TWO SPECIES OF LOACH FISHES (Cypriniformes: Nemacheilidae: Nemacheilus) BASED ON MORPHOLOGY AND MOLECULAR DATA","authors":"D. Rahayu","doi":"10.11598/btb.2023.30.2.1942","DOIUrl":null,"url":null,"abstract":"The identity of two local loaches, Nemacheilus chrysolaimos (Valenciennes, 1846) and N. fasciatus (Valenciennes, 1846), is revealed in this study using morphology and molecular approach based on our collection from six rivers at Biltar, East Java Indonesia. Based on morphology, these two species can be distinguished mainly from the dark bars or dark spots on the lateral body. The meristic data for N. chrysolaimos in this study is DII. 7–8 (dorsal fin), AI. 3–5 (anal fin), PI. 9 (pectoral fin), VI. 6–7 (ventral fin) and C. 17 (caudal fin), meanwhile, for N. fasciatus with D II 7–8 (dorsal fin), AI. 6 (anal fin), PI. 9–10 (pectoral fin), VI. 6–7 (ventral fin) and C. 17 (audal fin). There was a significant difference on the morphometric of N. fasciatus form sampling sites using Kruskal-Wallis Test. The nucleotide base composition sequences consisted of the mean of Thiamine (T) 29.565%, Cytosine (C) 32.023%, Adenine (A)  23.88%, and Guanine (G) 16.244%. Maximum Likelihood (ML) and Neighbour Joining (NJ) analysis was conducted using the Kimura 2 Parameter model to establish two major clades on Nemacheilus spp. and one out-groups clades significantly different from the Nemacheilus spp. These major  clades  were  closely related  to  each  other  at  the  100%  evidence of  bootstrap, which  grouped  as  genus Nemacheilus. The  present  study  on Nemacheilus spp.  from the Blitar  locality  was  able  to  differentiate  COI  sequences between N. fasciatus and N. chrysolaimos. Moreover, N. crysolaimos from references sequence  was inferred as the ancestor to N crysolaimos MZB 26540 and MZB 26539. ABGD analyses at a prior maximal distance of 0.025 also delineated this species into a separate partition.","PeriodicalId":38783,"journal":{"name":"Biotropia","volume":"45 1","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2023-08-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Biotropia","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.11598/btb.2023.30.2.1942","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"Agricultural and Biological Sciences","Score":null,"Total":0}
引用次数: 0

Abstract

The identity of two local loaches, Nemacheilus chrysolaimos (Valenciennes, 1846) and N. fasciatus (Valenciennes, 1846), is revealed in this study using morphology and molecular approach based on our collection from six rivers at Biltar, East Java Indonesia. Based on morphology, these two species can be distinguished mainly from the dark bars or dark spots on the lateral body. The meristic data for N. chrysolaimos in this study is DII. 7–8 (dorsal fin), AI. 3–5 (anal fin), PI. 9 (pectoral fin), VI. 6–7 (ventral fin) and C. 17 (caudal fin), meanwhile, for N. fasciatus with D II 7–8 (dorsal fin), AI. 6 (anal fin), PI. 9–10 (pectoral fin), VI. 6–7 (ventral fin) and C. 17 (audal fin). There was a significant difference on the morphometric of N. fasciatus form sampling sites using Kruskal-Wallis Test. The nucleotide base composition sequences consisted of the mean of Thiamine (T) 29.565%, Cytosine (C) 32.023%, Adenine (A)  23.88%, and Guanine (G) 16.244%. Maximum Likelihood (ML) and Neighbour Joining (NJ) analysis was conducted using the Kimura 2 Parameter model to establish two major clades on Nemacheilus spp. and one out-groups clades significantly different from the Nemacheilus spp. These major  clades  were  closely related  to  each  other  at  the  100%  evidence of  bootstrap, which  grouped  as  genus Nemacheilus. The  present  study  on Nemacheilus spp.  from the Blitar  locality  was  able  to  differentiate  COI  sequences between N. fasciatus and N. chrysolaimos. Moreover, N. crysolaimos from references sequence  was inferred as the ancestor to N crysolaimos MZB 26540 and MZB 26539. ABGD analyses at a prior maximal distance of 0.025 also delineated this species into a separate partition.
两种泥鳅鱼(鲤形目:泥鳅科:泥鳅科)形态和分子资料的进一步研究
本文利用形态学和分子生物学方法,对印度尼西亚东爪哇Biltar地区6条河流的泥鳅标本进行了研究,揭示了当地泥鳅Nemacheilus chrysolaimos (valciennes, 1846)和N. fasciatus (valciennes, 1846)的身份。从形态学上看,这两种主要可以从侧面的深色条纹或深色斑点来区分。本研究中赤藓属分生统计数据为DII。7-8(背鳍),AI。3-5(肛鳍),PI。9(胸鳍),VI. 6-7(腹鳍),C. 17(尾鳍);6(肛鳍),PI。9-10(胸鳍),VI. 6-7(腹鳍)和C. 17(鳍)。利用Kruskal-Wallis检验,不同采样点的筋膜库蚊形态差异有统计学意义。核苷酸碱基组成序列的平均值为硫胺素(T) 29.565%,胞嘧啶(C) 32.023%,腺嘌呤(A) 23.88%,鸟嘌呤(G) 16.244%。利用Kimura 2参数模型进行最大似然(ML)和邻居联结(NJ)分析,建立了Nemacheilus spp上的两个主枝和一个与Nemacheilus spp有显著差异的外群枝,这两个主枝在bootstrap的100%证据下彼此密切相关,归为Nemacheilus属。本研究对Blitar地区Nemacheilus spp.的COI序列进行了区分。此外,从参考序列推断出N. crysolaimos是N. crysolaimos MZB 26540和MZB 26539的祖先。先验最大距离为0.025的ABGD分析也将该种划分为一个单独的分区。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
Biotropia
Biotropia Agricultural and Biological Sciences-Agricultural and Biological Sciences (all)
CiteScore
0.70
自引率
0.00%
发文量
23
审稿时长
30 weeks
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信