Variational Bayesian analysis of nonuniformly sampled NMR data

IF 0.4 4区 化学 Q4 CHEMISTRY, PHYSICAL
Bradley Worley
{"title":"Variational Bayesian analysis of nonuniformly sampled NMR data","authors":"Bradley Worley","doi":"10.1002/cmr.a.21428","DOIUrl":null,"url":null,"abstract":"<p>Nonuniform sampling (NUS) offers NMR spectroscopists a means of accelerating data collection and increasing spectral quality in multidimensional (<i>n</i>D) experiments. The data from NUS experiments are incomplete by design, and must be reconstructed prior to use. While most existing reconstruction techniques compute point estimates of the true signal, Bayesian statistics offers a means of estimating <i>posterior distributions</i> over the signal, which enable more rigorous quantitation and uncertainty estimation. In this article, we describe the <i>variational</i> approach to approximating Bayesian posterior distributions, and illustrate how it can be applied to extend existing results from Bayesian spectrum analysis and compressed sensing. The new NUS reconstruction algorithms resulting from variational Bayes are computationally efficient, and offer new insights into the concepts of spectral sparsity and optimal sampling in NMR experiments.</p>","PeriodicalId":55216,"journal":{"name":"Concepts in Magnetic Resonance Part A","volume":"46A 2","pages":""},"PeriodicalIF":0.4000,"publicationDate":"2018-09-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://sci-hub-pdf.com/10.1002/cmr.a.21428","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Concepts in Magnetic Resonance Part A","FirstCategoryId":"92","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1002/cmr.a.21428","RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"CHEMISTRY, PHYSICAL","Score":null,"Total":0}
引用次数: 0

Abstract

Nonuniform sampling (NUS) offers NMR spectroscopists a means of accelerating data collection and increasing spectral quality in multidimensional (nD) experiments. The data from NUS experiments are incomplete by design, and must be reconstructed prior to use. While most existing reconstruction techniques compute point estimates of the true signal, Bayesian statistics offers a means of estimating posterior distributions over the signal, which enable more rigorous quantitation and uncertainty estimation. In this article, we describe the variational approach to approximating Bayesian posterior distributions, and illustrate how it can be applied to extend existing results from Bayesian spectrum analysis and compressed sensing. The new NUS reconstruction algorithms resulting from variational Bayes are computationally efficient, and offer new insights into the concepts of spectral sparsity and optimal sampling in NMR experiments.

非均匀采样核磁共振数据的变分贝叶斯分析
非均匀采样(NUS)为核磁共振波谱学家提供了一种加速数据收集和提高多维(nD)实验光谱质量的手段。NUS实验的数据是不完整的,必须在使用前重建。虽然大多数现有的重建技术计算真实信号的点估计,贝叶斯统计提供了一种估计信号后验分布的方法,这使得更严格的量化和不确定性估计成为可能。在本文中,我们描述了近似贝叶斯后验分布的变分方法,并说明了如何将其应用于扩展贝叶斯频谱分析和压缩感知的现有结果。由变分贝叶斯产生的新的NUS重建算法具有计算效率,并为谱稀疏性和核磁共振实验中最佳采样的概念提供了新的见解。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
CiteScore
0.90
自引率
0.00%
发文量
12
审稿时长
>12 weeks
期刊介绍: Concepts in Magnetic Resonance Part A brings together clinicians, chemists, and physicists involved in the application of magnetic resonance techniques. The journal welcomes contributions predominantly from the fields of magnetic resonance imaging (MRI), nuclear magnetic resonance (NMR), and electron paramagnetic resonance (EPR), but also encourages submissions relating to less common magnetic resonance imaging and analytical methods. Contributors come from academic, governmental, and clinical communities, to disseminate the latest important experimental results from medical, non-medical, and analytical magnetic resonance methods, as well as related computational and theoretical advances. Subject areas include (but are by no means limited to): -Fundamental advances in the understanding of magnetic resonance -Experimental results from magnetic resonance imaging (including MRI and its specialized applications) -Experimental results from magnetic resonance spectroscopy (including NMR, EPR, and their specialized applications) -Computational and theoretical support and prediction for experimental results -Focused reviews providing commentary and discussion on recent results and developments in topical areas of investigation -Reviews of magnetic resonance approaches with a tutorial or educational approach
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信