Fluid Segmentation in OCT with an Improved Convolutional Neural Network

Gang Xing, Jianqin Lei, Xiayu Xu
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Abstract

Multi-scale pathological fluid segmentation is of great importance for the diagnosis and treatment of various eye diseases such as neovascular age-related macular degeneration (nAMD) and diabetic macular edema (DME). Despite significant progress in recent years, there are still several important issues remain unsolved. First, abnormal fluid lesions in optical coherence tomography (OCT) show large variations in location, size, and shape. Second, fluid lesions are contiguous regions with smooth surfaces and without holes inside. In this study, we introduce an adapted fully convolutional neural network (FCN) architecture to improve the ability of the network to extract multi-scale fluid lesions in OCT. Then we introduced a novel curvature loss term to regularize the shape prior in the loss function. The proposed method was extensively evaluated on RETOUCH dataset with a mean Dice score (DSC) of 0.767 and mean absolute volume difference (AVD) of 0.036 mm3, which improved significantly compared with the state-of-the-art methods.
基于改进卷积神经网络的OCT流体分割
多尺度病理液体分割对于新血管性年龄相关性黄斑变性(nAMD)、糖尿病性黄斑水肿(DME)等多种眼病的诊断和治疗具有重要意义。尽管近年来取得了重大进展,但仍有几个重要问题尚未解决。首先,在光学相干断层扫描(OCT)中,异常的液体病变在位置、大小和形状上显示出很大的变化。其次,流体病变是表面光滑且内部没有孔的连续区域。在本研究中,我们引入了自适应全卷积神经网络(FCN)架构来提高网络在oct中提取多尺度流体病变的能力,并引入了一种新的曲率损失项来正则化损失函数中的形状先验。在RETOUCH数据集上对该方法进行了广泛的评估,平均Dice评分(DSC)为0.767,平均绝对体积差(AVD)为0.036 mm3,与现有方法相比有显著提高。
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