{"title":"Driving solar coronal MHD simulations on high-performance computers","authors":"P. Bourdin","doi":"10.1080/03091929.2019.1643849","DOIUrl":null,"url":null,"abstract":"ABSTRACT The quality of today's research is often tightly limited to the available computing power and scalability of codes to many processors. For example, tackling the problem of heating the solar corona requires a most realistic description of the plasma dynamics and the magnetic field. Numerically solving such a magneto-hydrodynamical (MHD) description of a small active region (AR) on the Sun requires millions of computation hours on current high-performance computing (HPC) hardware. The aim of this work is to describe methods for an efficient parallelisation of boundary conditions and data input/output (IO) strategies that allow for a better scaling towards thousands of processors (CPUs). The Pencil Code is tested before and after optimisation to compare the performance and scalability of a coronal MHD model above an AR. We present a novel boundary condition for non-vertical magnetic fields in the photosphere, where we approach the realistic pressure increase below the photosphere. With that, magnetic flux bundles become narrower with depth and the flux density increases accordingly. The scalability is improved by more than one order of magnitude through the HPC-friendly boundary conditions and IO strategies. This work describes also the necessary nudging methods to drive the MHD model with observed magnetic fields from the Sun's photosphere. In addition, we present the upper and lower atmospheric boundary conditions (photospheric and towards the outer corona), including swamp layers to diminish perturbations before they reach the boundaries. Altogether, these methods enable more realistic 3D MHD simulations than previous models regarding the coronal heating problem above an AR – simply because of the ability to use a large amount of CPUs efficiently in parallel.","PeriodicalId":56132,"journal":{"name":"Geophysical and Astrophysical Fluid Dynamics","volume":"100 1","pages":"235 - 260"},"PeriodicalIF":1.1000,"publicationDate":"2019-07-29","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"6","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Geophysical and Astrophysical Fluid Dynamics","FirstCategoryId":"89","ListUrlMain":"https://doi.org/10.1080/03091929.2019.1643849","RegionNum":4,"RegionCategory":"地球科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"ASTRONOMY & ASTROPHYSICS","Score":null,"Total":0}
引用次数: 6
Abstract
ABSTRACT The quality of today's research is often tightly limited to the available computing power and scalability of codes to many processors. For example, tackling the problem of heating the solar corona requires a most realistic description of the plasma dynamics and the magnetic field. Numerically solving such a magneto-hydrodynamical (MHD) description of a small active region (AR) on the Sun requires millions of computation hours on current high-performance computing (HPC) hardware. The aim of this work is to describe methods for an efficient parallelisation of boundary conditions and data input/output (IO) strategies that allow for a better scaling towards thousands of processors (CPUs). The Pencil Code is tested before and after optimisation to compare the performance and scalability of a coronal MHD model above an AR. We present a novel boundary condition for non-vertical magnetic fields in the photosphere, where we approach the realistic pressure increase below the photosphere. With that, magnetic flux bundles become narrower with depth and the flux density increases accordingly. The scalability is improved by more than one order of magnitude through the HPC-friendly boundary conditions and IO strategies. This work describes also the necessary nudging methods to drive the MHD model with observed magnetic fields from the Sun's photosphere. In addition, we present the upper and lower atmospheric boundary conditions (photospheric and towards the outer corona), including swamp layers to diminish perturbations before they reach the boundaries. Altogether, these methods enable more realistic 3D MHD simulations than previous models regarding the coronal heating problem above an AR – simply because of the ability to use a large amount of CPUs efficiently in parallel.
期刊介绍:
Geophysical and Astrophysical Fluid Dynamics exists for the publication of original research papers and short communications, occasional survey articles and conference reports on the fluid mechanics of the earth and planets, including oceans, atmospheres and interiors, and the fluid mechanics of the sun, stars and other astrophysical objects.
In addition, their magnetohydrodynamic behaviours are investigated. Experimental, theoretical and numerical studies of rotating, stratified and convecting fluids of general interest to geophysicists and astrophysicists appear. Properly interpreted observational results are also published.