Classification of the Senescence-Accelerated Mouse (SAM) Strains With Its Behaviour Using Deep Learning

S. Z. Alrashid, Mohammed Dosh, Ahmed J. Obaid
{"title":"Classification of the Senescence-Accelerated Mouse (SAM) Strains With Its Behaviour Using Deep Learning","authors":"S. Z. Alrashid, Mohammed Dosh, Ahmed J. Obaid","doi":"10.4018/ijec.304035","DOIUrl":null,"url":null,"abstract":"Microarray technology is a novel method to monitor the levels of expression of a huge number of genes simultaneously.this study aims at (1) identifying the most important genes in the molecular senescence of the hippocampus and retina, where both with accelerated neurological senescence (S10 and 8) models were obtainable. By using feature selection to reduce the size of high dimensional data. Hence, the process of gene selection is twofold; removing the irrelevant genes and selecting the informative genes, and (2) The determination of the study is to specify the association among these genes or pathways that would deliver insight into the mechanism for this phenotype which will be greater to the current imperfect state-of-the-art estimates. In this study, gene selection methods have been implemented, including Analysis of Variance (ANOVA). The results are showed that CNN model achieve 0.98 accuracy based on a subset of genes from ANOVA method. Thus, Genes subset selected is achieved a better accuracy at classification and a little time of processing.","PeriodicalId":13957,"journal":{"name":"Int. J. e Collab.","volume":"42 1","pages":"1-13"},"PeriodicalIF":0.0000,"publicationDate":"2022-03-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Int. J. e Collab.","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.4018/ijec.304035","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0

Abstract

Microarray technology is a novel method to monitor the levels of expression of a huge number of genes simultaneously.this study aims at (1) identifying the most important genes in the molecular senescence of the hippocampus and retina, where both with accelerated neurological senescence (S10 and 8) models were obtainable. By using feature selection to reduce the size of high dimensional data. Hence, the process of gene selection is twofold; removing the irrelevant genes and selecting the informative genes, and (2) The determination of the study is to specify the association among these genes or pathways that would deliver insight into the mechanism for this phenotype which will be greater to the current imperfect state-of-the-art estimates. In this study, gene selection methods have been implemented, including Analysis of Variance (ANOVA). The results are showed that CNN model achieve 0.98 accuracy based on a subset of genes from ANOVA method. Thus, Genes subset selected is achieved a better accuracy at classification and a little time of processing.
基于深度学习的衰老加速小鼠(SAM)品系行为分类
微阵列技术是一种同时监测大量基因表达水平的新方法。本研究旨在(1)确定海马和视网膜分子衰老中最重要的基因,其中两种加速神经衰老(S10和8)模型均可获得。通过特征选择来减小高维数据的大小。因此,基因选择的过程是双重的;(2)研究的目的是明确这些基因或途径之间的关联,从而深入了解这种表型的机制,这将比目前不完善的最先进的估计更重要。在本研究中,采用了包括方差分析(ANOVA)在内的基因选择方法。结果表明,基于方差分析方法的基因子集,CNN模型的准确率达到0.98。因此,所选择的基因子集具有较高的分类精度和较少的处理时间。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
自引率
0.00%
发文量
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信