Solving the problem of storing trajectories of molecular dynamics in a DBMS

Abstract

The paper solves the problem of storing molecular dynamics trajectories in relational and non-relational databases. The traditional approach to organizing the structure of relational tables is not suitable for storing trajectories due to the appearance of a large number of records in one table. It is described how best to place data in the NoSQL class DBMS. These ideas are then transferred to the MySQL relational DBMS.