Genetic Diversity and Relationship Analysis of 21 Walnut Varieties Based on SSR Markers

Ling-ling Xu, Yi Wang, Xiaolong Yuan, B. Lu, Jia-bo Hao, Yu Zhang, Jun-Hui Ma, Fei Wang
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Abstract

In order to grasp the germplasm resources of walnut in Yunnan province, the genetic diversity and relationship of 21 walnuts varieties commonly planted in Yunnan province were analyzed using SSR fluorescent labeling technology. The results showed that the average number of allelic loci of 12 pairs of primers used in 21 walnut species samples was 7.916 7. The mean number of alleles, Shannon Wiener index (I) and polymorphic information content (PIC) per locus were 4.3516, 1.643 6 and 0.705 5. Twelve pairs of polymorphism information content (PIC) were higher than 0.25, indicating that the 12 pairs of primers had good polymorphism in the samples. In the phylogenetic analysis, the 21 walnut varieties were divided into 7 subgroups, indicating that the 21 walnut varieties had rich genetic diversity, extensive gene exchange and complex genetic background in the breeding process.
基于SSR标记的21个核桃品种遗传多样性及亲缘关系分析
为了掌握云南核桃种质资源,利用SSR荧光标记技术对云南21个常用核桃品种的遗传多样性和亲缘关系进行了分析。结果表明,在21种核桃样品中,12对引物的平均等位位点数为7.916个。每个位点的平均等位基因数、Shannon Wiener指数(I)和多态性信息含量(PIC)分别为4.3516、1.643和0.7055。12对引物的多态性信息含量(PIC)均大于0.25,说明12对引物在样品中具有较好的多态性。系统发育分析将21个核桃品种划分为7个亚群,表明21个核桃品种在育种过程中具有丰富的遗传多样性、广泛的基因交换和复杂的遗传背景。
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