Chromatin organization and methylation patterns of wheat 5 S RNA genes (Triticum aestivum var. hardi)

Françoise Grellet, Paul Penon
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引用次数: 4

Abstract

The organization of 5 S rRNA genes was examined in the wheat, Triticum aestivum var. Hardi, and three size classes of repeated units were recognized. Digestion with micrococcal nuclease of nuclei from ungerminated embryos or from embryos germinated for 48 h revealed that these tissues have 5 S genes organized into nucleosomes with repeat lengths similar to those of bulk chromatin. No special arrangement of nucleosomes with respect to 5 S DNA sequences was found. The 5 S DNA methylation pattern was determined in genomic DNA at both developmental stages. The 410 bp unit family has significant undermethylation at CCGG sites, in both active and inactive tissues. This is in marked contrast to the situation with the 500 bp unit family, which has nearly all CCGG sites methylated at both developmental stages.

小麦5s RNA基因的染色质组织和甲基化模式
对5个S rRNA基因在小麦(Triticum aestivum var和Hardi)中的组织结构进行了分析,鉴定出3个大小级的重复单位。用微球菌核酸酶消化未萌发胚胎和萌发48 h胚胎的细胞核,发现这些组织中有5个S基因组成核小体,重复长度与散装染色质相似。在5 S DNA序列中没有发现核小体的特殊排列。在两个发育阶段的基因组DNA中都确定了5s DNA甲基化模式。410 bp单位家族在CCGG位点存在显著的低甲基化,在活性和非活性组织中都是如此。这与500 bp单位家族的情况形成鲜明对比,后者在两个发育阶段几乎所有CCGG位点都甲基化。
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