Flavonoids in Astragali Radix Functions as Regulators of CDK2, VEGFA and MYC in Osteoporosis and Type 1 Diabetes Mellitus

X. Qu, Xiangding Chen, Zimeng Liu, Xuemei Zuo, Yisheng Cai, Yuyang Zuo, Keqiang Ma, Shuang Wu
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Abstract

People with type 1 diabetes mellitus (T1DM) are significantly more likely to have osteoporosis (OP). Astragali Radix is a Chinese herbal medicine containing various active ingredients, and several clinical trials have been reported to use it to treat OP and T1DM, respectively. To evaluate the targets and potential mechanisms of Astragali Radix administration on OP and T1DM. The targets of Astragali Radix were identified using the Traditional Chinese Medicine Systems Pharmacology (TCMSP) database. The OP and T1DM datasets were downloaded from the Gene Expression Omnibus (GEO) database. The weighted gene correlation network analysis (WGCNA) method was used to identify the co-expression genes associated with OP and T1DM. In addition, the common gene targets of OP and T1DM were screened using two public databases. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analyses were performed using the R tool. After the validation of key genes, molecular docking was performed to visualize small molecule-protein interactions. The compound target network mainly contained 17 compounds and 147 corresponding targets. There were 561 GO items and 154 signaling pathways in KEGG, mainly including the AGE-RAGE signaling pathway in diabetic complications and osteoclast differentiation. The results of molecular docking showed that flavonoids were the top compound of Astragali Radix, which had a high affinity with CDK2, VEGFA, and MYC. Flavonoids in Astragali Radix may regulate multiple signaling pathways through MYC, CDK2, and VEGFA, which may play a therapeutic role in OP and T1DM.
黄芪黄酮类化合物在骨质疏松症和1型糖尿病中调节CDK2、VEGFA和MYC的作用
1型糖尿病(T1DM)患者更易患骨质疏松症(OP)。黄芪是一种含有多种有效成分的中草药,有几项临床试验报道用黄芪分别治疗OP和T1DM。探讨黄芪对OP和T1DM的作用靶点及可能机制。利用中药系统药理学(TCMSP)数据库对黄芪的靶点进行了鉴定。OP和T1DM数据集从Gene Expression Omnibus (GEO)数据库下载。采用加权基因相关网络分析(WGCNA)方法鉴定与OP和T1DM相关的共表达基因。此外,利用两个公共数据库筛选OP和T1DM的共同基因靶点。使用R工具进行基因本体(GO)和京都基因与基因组百科全书(KEGG)富集分析。在验证关键基因后,进行分子对接以可视化小分子-蛋白质相互作用。化合物靶点网络主要包含17种化合物和147个对应靶点。KEGG中有561个GO项目和154条信号通路,主要包括糖尿病并发症和破骨细胞分化中的AGE-RAGE信号通路。分子对接结果表明,黄酮类化合物是黄芪的顶层化合物,与CDK2、VEGFA和MYC具有较高的亲和力。黄芪黄酮类化合物可能通过MYC、CDK2和VEGFA调控多种信号通路,可能在OP和T1DM中发挥治疗作用。
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