Computational Repurposing of Certain Monoclonal Antibodies for the Treatment of Systemic Lupus Erythematosus

IF 0.2 Q4 IMMUNOLOGY
H. Al-Madhagi
{"title":"Computational Repurposing of Certain Monoclonal Antibodies for the Treatment of Systemic Lupus Erythematosus","authors":"H. Al-Madhagi","doi":"10.4274/tji.galenos.2023.88700","DOIUrl":null,"url":null,"abstract":"Objective: More than 3 million individuals globally suffer from systemic lupus erythematosus (SLE) with no radical therapy for such a multi-organ disease. The present in silico study explores the virtual repurposing of certain monoclonal antibodies (mAb) against the emerging target toll-like receptor 7 (TLR-7). Materials and Methods: The 3D structure of TLR-7 and the shortlisted mAb were retrieved from Alphafold and Thera-SabDab datasets, which were then subjected to docking by pyDockWEB and HDOCK webservers. Molecular dynamics (MD) simulations and MM/GBSA were also predicted for the best docked complex. Results: Bevacizumab was the best potential antagonist mAb of human TLR-7 in terms of protein docking. MD simulations unveiled the stability and the flexibility of the docked complex and MM/GBSA predicted the hotspot residues of the TLR-7-Bevacizumab. Conclusion: Bevacizumab can be deemed as potential repurposed mAb for treating SLE in silico , which needs experimental validation.","PeriodicalId":41088,"journal":{"name":"Turkish Journal of Immunology","volume":null,"pages":null},"PeriodicalIF":0.2000,"publicationDate":"2023-09-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Turkish Journal of Immunology","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.4274/tji.galenos.2023.88700","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"IMMUNOLOGY","Score":null,"Total":0}
引用次数: 0

Abstract

Objective: More than 3 million individuals globally suffer from systemic lupus erythematosus (SLE) with no radical therapy for such a multi-organ disease. The present in silico study explores the virtual repurposing of certain monoclonal antibodies (mAb) against the emerging target toll-like receptor 7 (TLR-7). Materials and Methods: The 3D structure of TLR-7 and the shortlisted mAb were retrieved from Alphafold and Thera-SabDab datasets, which were then subjected to docking by pyDockWEB and HDOCK webservers. Molecular dynamics (MD) simulations and MM/GBSA were also predicted for the best docked complex. Results: Bevacizumab was the best potential antagonist mAb of human TLR-7 in terms of protein docking. MD simulations unveiled the stability and the flexibility of the docked complex and MM/GBSA predicted the hotspot residues of the TLR-7-Bevacizumab. Conclusion: Bevacizumab can be deemed as potential repurposed mAb for treating SLE in silico , which needs experimental validation.
某些单克隆抗体用于治疗系统性红斑狼疮的计算重组
目的:全球超过300万人患有系统性红斑狼疮(SLE),这种多器官疾病没有根治性治疗。目前的硅研究探索了某些单克隆抗体(mAb)针对新出现的靶toll样受体7 (TLR-7)的虚拟重新用途。材料和方法:从Alphafold和Thera-SabDab数据库中检索TLR-7的三维结构和入围单抗,然后通过pyDockWEB和HDOCK web服务器进行对接。分子动力学(MD)模拟和MM/GBSA预测了最佳对接物。结果:在蛋白对接方面,贝伐单抗是人TLR-7的最佳潜在拮抗剂单抗。MD模拟揭示了对接复合物的稳定性和灵活性,MM/GBSA预测了tlr -7-贝伐单抗的热点残基。结论:贝伐珠单抗可被认为是潜在的系统性系统性红斑狼疮再用单抗,有待实验验证。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
CiteScore
0.90
自引率
0.00%
发文量
14
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信