Phylogenetics of the Borage Family: Delimiting Boraginales and Assessing Closest Relatives

Aliso Pub Date : 2017-01-01 DOI:10.5642/ALISO.20173501.04
Kristen Hasenstab-Lehman
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引用次数: 5

Abstract

The placement of Boraginales, and relationships within the family have remained elusive in modern, broad phylogenetic studies. In order to assess the phylogeny of Boraginales, and specifically to test the sister lineage of the order, a data matrix of the chloroplast markers rbcL, ndhF, and trnL-trnF was assembled fromGenBank and de novo sequences (representing 132 newGenBank accessions). Phylogenies inferred using Maximum Likelihood and Bayesian frameworks resulted in identical topologies. Tests for alternative topologies were used to assess whether any of the candidates for sister (Solanales, Gentianales, Lamiales, or Vahlia) to Boraginales could be ruled out with this dataset. Gentianales was eliminated as the possible closest relative to Boraginales. Additionally, SH tests were used to test topological results within Boraginales: monophyly of Hydrophyllaceae cannot be rejected and paraphyly of Ehretiaceae with respect to the parasitic Lennoaceae is supported. Taxonomic implications are discussed within the context of these phylogenetic results.
琉璃苣科的系统发育:琉璃苣科的划分和近亲的鉴定
在现代广泛的系统发育研究中,博拉基纳目的位置和家族内的关系仍然难以捉摸。为了评估该植物的系统发育,特别是对其姐妹谱系进行检测,我们从genbank和de novo序列(代表132个genbank新加入的序列)中收集了叶绿体标记rbcL、ndhF和trnL-trnF的数据矩阵。系统发生推断使用最大似然和贝叶斯框架导致相同的拓扑结构。使用替代拓扑的测试来评估是否可以使用该数据集排除Boraginales的姐妹(Solanales, Gentianales, Lamiales或Vahlia)的任何候选人。作为可能与博拉基纳莱斯最接近的亲戚,龙胆亚纳莱斯被排除了。此外,SH测试被用于测试Boraginales的拓扑结果:不能拒绝hydrophyllacae的单系性,并且支持Ehretiaceae相对于寄生Lennoaceae的半系性。在这些系统发育结果的背景下讨论了分类学意义。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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