Identification of Rabbit Myostatin Gene Polymorphisms

T. I. Amalianingsih, B. Brahmantiyo, Jakaria
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Abstract

The existence of selection on the rabbits with potential for meat has only been seen from phenotypic aspects including performance and productivity, while the molecular genetic studies are still very rare. One of the candidate genes for meat production traits in rabbit is myostatin. Totally 50 blood samples of male rabbits from Rex, Satin, Reza (crossing from Rex and Satin), Flemish Giant and FZ3 (crossing from Flemish Giant and Reza) breed were used at Indonesian Research Institute for Animal Production (IRIAP). Genetic polymorphism by Polymerase Chain Reaction – Restriction Fragment Length Polymorphism (PCR-RFLP) method used FspBI restriction enzyme. PCR-RFLP data were analyzed by calculating allele and genotype frequencies. Sequencing was performed in rabbit with different genotypes which represents each of the samples. Genotype of AT had two cut points of the FspBI restriction enzyme at the base position of 508 bp and 444 bp. The cut point at the base position of 446 bp was site mutation base T became A. Genotype of TT had one cut point at the base position of 508 bp and no mutation site. Allele T had higher frequency than allele A and just Rex and Reza rabbit breeds had two alleles. The other rabbits (Satin, Flemish Giant and FZ3) only had one allele i.e., allele T. PCR - RFLP analysis of the MSTN| FspBI gene segments was polymorphic in Rex and Reza rabbit breeds. All of rabbit breeds in this study did not have AA genotype. Key words: myostatin gene, rabbit
兔肌生长抑制素基因多态性的鉴定
对肉用潜力家兔存在选择的研究,目前仅从表现和生产能力等表型方面进行,而分子遗传学方面的研究还很少。兔产肉性状的候选基因之一是肌肉生长抑制素。在印度尼西亚动物生产研究所(IRIAP)采集了Rex、Satin、Reza (Rex和Satin杂交)、Flemish Giant和FZ3 (Flemish Giant和Reza杂交)品种的50只雄性兔子的血液样本。采用FspBI限制性内切酶,采用聚合酶链反应-限制性片段长度多态性(PCR-RFLP)方法进行遗传多态性分析。通过计算等位基因和基因型频率对PCR-RFLP数据进行分析。对代表每种样品的不同基因型的家兔进行测序。AT基因型的FspBI酶切位点分别位于508 bp和444 bp的碱基位置。在446 bp的碱基位置切割点为突变碱基T变成a的位点,TT基因型在508 bp的碱基位置有一个切割点,没有突变位点。等位基因T的出现频率高于等位基因A,只有雷克斯和雷扎两种家兔有2个等位基因。其余家兔(Satin、Flemish Giant和FZ3)只有1个等位基因,即等位基因t。PCR - RFLP分析显示,MSTN| FspBI基因片段在Rex和Reza家兔中存在多态性。本研究的所有家兔品种均未出现AA基因型。关键词:肌肉生长抑制素基因;家兔
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