Molecular Cloning and Tissue-specific Expression of Cu/Zn and Mn-superoxide Dismutase in the Three-keeled Pond Turtle, Chinemys reevesii

IF 1.2 3区 生物学 Q2 ZOOLOGY
Xiaojing, Jia, Cuijuan, Niu
{"title":"Molecular Cloning and Tissue-specific Expression of Cu/Zn and Mn-superoxide Dismutase in the Three-keeled Pond Turtle, Chinemys reevesii","authors":"Xiaojing, Jia, Cuijuan, Niu","doi":"10.3724/SP.J.1245.2013.00079","DOIUrl":null,"url":null,"abstract":"Both copper/zinc superoxide dismutase(SOD; Cu/Zn-SOD, SOD1) cDNA and manganese SOD(Mn-SOD, SOD2) cDNA were cloned for the first time from the three-keeled pond turtle, Chinemys reevesii, using RT-PCR and RACE methods in this work. The SOD1 cDNA was 749 bp long and consisted of a 32-bp 5’-untranslated region(UTR), a 249-bp 3’-UTR, and a 468-bp open reading frame(ORF) encoding a 155-amino-acid protein with 16.0 kDa predicted molecular mass and 5.95 theoretical isoelectric point(pI). The SOD2 cDNA was 1687 bp long and comprised 94-bp of 5’-UTR, 912-bp 3’-UTR and 681-bp ORF encoding a 226-amino-acid protein with 25.0 kDa predicted molecular mass and 8.83 pI. The deduced amino acid sequence of SOD1 showed relatively high similarity(77.4%–87.1%) and identity(65.4%–74.4%) with the published sequences of SOD1 from other vertebrate species, whereas SOD2 protein shared slightly higher similarity(83.6%–95.6%) and identity(76.1%–88.9%) with other reported vertebrates SOD2s. Phylogenetic analysis revealed that the C. reevesii SOD1 and SOD2 were separately clustered together, and were highly conserved during evolution. Both SOD mRNA expression was detected widely in the brain, liver, muscle, kidney, gut, spleen, lung and heart at variable levels. The highest expression of the two SODs was observed in muscle, and followed in brain, liver, kidney, gut and heart, whereas low transcriptional levels were found in spleen and lung. Meanwhile, high activity of SOD1 was kept in brain, liver, muscle, kidney and heart, and followed in gut, spleen and lung. The activities of SOD2 in brain, liver, muscle, kidney, gut and heart were significantly higher than those in spleen and lung.","PeriodicalId":49236,"journal":{"name":"Asian Herpetological Research","volume":null,"pages":null},"PeriodicalIF":1.2000,"publicationDate":"2013-12-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Asian Herpetological Research","FirstCategoryId":"1089","ListUrlMain":"https://doi.org/10.3724/SP.J.1245.2013.00079","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"ZOOLOGY","Score":null,"Total":0}
引用次数: 0

Abstract

Both copper/zinc superoxide dismutase(SOD; Cu/Zn-SOD, SOD1) cDNA and manganese SOD(Mn-SOD, SOD2) cDNA were cloned for the first time from the three-keeled pond turtle, Chinemys reevesii, using RT-PCR and RACE methods in this work. The SOD1 cDNA was 749 bp long and consisted of a 32-bp 5’-untranslated region(UTR), a 249-bp 3’-UTR, and a 468-bp open reading frame(ORF) encoding a 155-amino-acid protein with 16.0 kDa predicted molecular mass and 5.95 theoretical isoelectric point(pI). The SOD2 cDNA was 1687 bp long and comprised 94-bp of 5’-UTR, 912-bp 3’-UTR and 681-bp ORF encoding a 226-amino-acid protein with 25.0 kDa predicted molecular mass and 8.83 pI. The deduced amino acid sequence of SOD1 showed relatively high similarity(77.4%–87.1%) and identity(65.4%–74.4%) with the published sequences of SOD1 from other vertebrate species, whereas SOD2 protein shared slightly higher similarity(83.6%–95.6%) and identity(76.1%–88.9%) with other reported vertebrates SOD2s. Phylogenetic analysis revealed that the C. reevesii SOD1 and SOD2 were separately clustered together, and were highly conserved during evolution. Both SOD mRNA expression was detected widely in the brain, liver, muscle, kidney, gut, spleen, lung and heart at variable levels. The highest expression of the two SODs was observed in muscle, and followed in brain, liver, kidney, gut and heart, whereas low transcriptional levels were found in spleen and lung. Meanwhile, high activity of SOD1 was kept in brain, liver, muscle, kidney and heart, and followed in gut, spleen and lung. The activities of SOD2 in brain, liver, muscle, kidney, gut and heart were significantly higher than those in spleen and lung.
三龙骨塘龟Cu/Zn和mn超氧化物歧化酶的克隆及组织特异性表达[j]
铜/锌超氧化物歧化酶(SOD;利用RT-PCR和RACE技术,首次从三龙骨塘龟中克隆到Cu/Zn-SOD, SOD1) cDNA和锰-SOD (Mn-SOD, SOD2) cDNA。SOD1 cDNA全长749 bp,由一个32 bp的5 ' -未翻译区(UTR)、一个249 bp的3 ' -未翻译区(UTR)和一个468 bp的开放阅读框(ORF)组成,编码一个155个氨基酸的蛋白,预测分子量为16.0 kDa,理论等电点(pI)为5.95。SOD2 cDNA全长1687 bp,由94 bp的5 ' -UTR、912 bp的3 ' -UTR和681 bp的ORF组成,编码一个226个氨基酸的蛋白,预计分子质量为25.0 kDa, pI为8.83。SOD1的氨基酸序列与已发表的其他脊椎动物SOD1序列具有较高的相似性(77.4% ~ 87.1%)和同源性(65.4% ~ 74.4%),而SOD2蛋白与其他已报道的脊椎动物SOD2s序列具有较高的相似性(83.6% ~ 95.6%)和同源性(76.1% ~ 88.9%)。系统发育分析表明,C. reevesii SOD1和SOD2分别聚集在一起,在进化过程中具有高度的保守性。在脑、肝、肌肉、肾、肠、脾、肺和心脏中均有不同水平的SOD mRNA表达。这两种sod在肌肉中表达量最高,其次是脑、肝、肾、肠和心脏,而在脾脏和肺中表达量较低。同时,SOD1在脑、肝、肌、肾、心、肠、脾、肺中均保持较高活性。SOD2在脑、肝、肌肉、肾、肠和心脏的活性显著高于脾和肺。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
CiteScore
2.80
自引率
7.10%
发文量
441
审稿时长
>12 weeks
期刊介绍: AHR aims to provide a forum for herpetologists and related scientists interested in conducting international academic exchanges and joint studies, and a platform for introducing their newly made scientific and technological data, and publishing their research results and achievements in the world, but focusing on the Asian-Pacific Region. The principal criteria of AHR for acceptance of articles for publication are the quality and significance of the research, breadth of interest of the work to the readership, and the clarity and effectiveness of communication. AHR welcomes submission of manuscripts from authors in all countries of the world, though with a focus on the herpetological studies in the Asian and Pacific Region, including major articles, shorter communications and review articles.
文献相关原料
公司名称 产品信息 采购帮参考价格
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信