Dennis Ferreira, Leticia Rodrigues, Fabiola Pereira, Edenir Pereira‑Filho
{"title":"PRINCIPAL COMPONENT ANALYSIS (PCA) PARA A AVALIAÇÃO DE DADOS QUÍMICOS E GERAÇÃO DE HEAT MAPS: UM TUTORIAL","authors":"Dennis Ferreira, Leticia Rodrigues, Fabiola Pereira, Edenir Pereira‑Filho","doi":"10.21577/0100-4042.20230030","DOIUrl":null,"url":null,"abstract":"PRINCIPAL COMPONENT ANALYSIS (PCA) FOR CHEMICAL DATA EVALUATION AND HEAT MAPS PREPARATION: A TUTORIAL. This tutorial shows a step-by-step guide on handling big datasets using principal component analysis (PCA). A dataset of chemical elements, concentration, emission spectrum, and energy-dispersive X-ray fluorescence (EDXRF) of e-waste were used as examples. Five routines were proposed to apply data processing and PCA calculation focusing data from laser-induced breakdown spectroscopy (LIBS), EDXRF, and heat maps preparation. These routines can be used in various softwares such as MatLab, Octave, R, and Python. PCA was applied in three examples; the first was for concentrations, and the other two were for spectra. An example of heat maps assembling a hyperspectral image of a printed circuit was also described. In addition, a playlist was created on YouTube using the available examples. Therefore, with this tutorial, it may be possible to learn how to deal with a large volume of data by applying PCA. The authors hope to contribute to those researching in the area.","PeriodicalId":49641,"journal":{"name":"Quimica Nova","volume":"1 1","pages":""},"PeriodicalIF":0.5000,"publicationDate":"2023-08-28","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Quimica Nova","FirstCategoryId":"92","ListUrlMain":"https://doi.org/10.21577/0100-4042.20230030","RegionNum":4,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"CHEMISTRY, MULTIDISCIPLINARY","Score":null,"Total":0}
引用次数: 0
Abstract
PRINCIPAL COMPONENT ANALYSIS (PCA) FOR CHEMICAL DATA EVALUATION AND HEAT MAPS PREPARATION: A TUTORIAL. This tutorial shows a step-by-step guide on handling big datasets using principal component analysis (PCA). A dataset of chemical elements, concentration, emission spectrum, and energy-dispersive X-ray fluorescence (EDXRF) of e-waste were used as examples. Five routines were proposed to apply data processing and PCA calculation focusing data from laser-induced breakdown spectroscopy (LIBS), EDXRF, and heat maps preparation. These routines can be used in various softwares such as MatLab, Octave, R, and Python. PCA was applied in three examples; the first was for concentrations, and the other two were for spectra. An example of heat maps assembling a hyperspectral image of a printed circuit was also described. In addition, a playlist was created on YouTube using the available examples. Therefore, with this tutorial, it may be possible to learn how to deal with a large volume of data by applying PCA. The authors hope to contribute to those researching in the area.
期刊介绍:
Química Nova publishes in portuguese, spanish and english, original research articles, revisions, technical notes and articles about education in chemistry. All the manuscripts submitted to QN are evaluated by, at least, two reviewers (from Brazil and abroad) of recognized expertise in the field of chemistry involved in the manuscript. The Editorial Council can be eventually asked to review manuscripts. Editors are responsible for the final edition of QN.