/spl Phi/LOG: a domain specific language for solving phylogenetic inference problems

Abstract

Domain experts think and reason at a high level of abstraction when they solve problems in their domain of expertise. We present the design and motivation behind a domain specific language (DSL), called /spl Phi/LOG, to enable biologists (domain experts) to program solutions to phylogenetic inference problems at a very high level of abstraction. The implementation infrastructure (interpreter, compiler, debugger) for the DSL is automatically obtained through a software engineering framework based on denotational semantics and logic programming.