Exploration of the link between COVID-19 and alcoholic hepatitis from the perspective of bioinformatics and systems biology

Tengda Huang, Bingxuan Yu, Xinyi Zhou, Hongyuan Pan, Ao Du, Jincheng Bai, Xiaoquan Li, Nan Jiang, Jinyi He, Kefei Yuan, Zhen Wang
{"title":"Exploration of the link between COVID-19 and alcoholic hepatitis from the perspective of bioinformatics and systems biology","authors":"Tengda Huang,&nbsp;Bingxuan Yu,&nbsp;Xinyi Zhou,&nbsp;Hongyuan Pan,&nbsp;Ao Du,&nbsp;Jincheng Bai,&nbsp;Xiaoquan Li,&nbsp;Nan Jiang,&nbsp;Jinyi He,&nbsp;Kefei Yuan,&nbsp;Zhen Wang","doi":"10.1002/mef2.42","DOIUrl":null,"url":null,"abstract":"<p>Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has been suggested to purpose threats to health of mankind. Alcoholic hepatitis (AH) is a life-threatening acute and chronic liver failure that takes place in sufferers who drink excessively. During the epidemic, AH has an increasing incidence of severe illness and mortality. The intrinsic relationship of molecular pathogenesis, as well as common therapeutic strategies for two diseases are still poorly understood. The transcriptome of the COVID-19 and AH has been compared to obtain the altered genes and hub genes were screened out through protein–protein interaction (PPI) network analysis. Via gene ontology (GO), pathway enrichment, and transcription regulator analysis, a deeper appreciation of the interplay mechanism between hub genes were established. Finally, gene-disease and gene–drug analysis were displayed to instruct the clinical treatments. With 181 common differentially expressed genes (DEGs) of AH and COVID-19 were obtained, 10 hub genes were captured. Follow-up studies located that these 10 genes typically mediated the diseases occurrence by regulating the activities of the immune system. Other results suggest that the common pathways of the two ailments are enriched in regulating the function of immune cells and release of immune molecules. The top 10 drug candidates have been chosen primarily, some of which have been proved effective in treating AH sufferers infected with COVID-19. This study reveals the common pathogenesis of COVID-19 and AH and assist to discover necessary therapeutic targets to combat the ongoing pandemic induced via SARS-CoV-2 infection and acquire promising remedy strategies for the two diseases.</p>","PeriodicalId":74135,"journal":{"name":"MedComm - Future medicine","volume":"2 2","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2023-06-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/mef2.42","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"MedComm - Future medicine","FirstCategoryId":"1085","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1002/mef2.42","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0

Abstract

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) has been suggested to purpose threats to health of mankind. Alcoholic hepatitis (AH) is a life-threatening acute and chronic liver failure that takes place in sufferers who drink excessively. During the epidemic, AH has an increasing incidence of severe illness and mortality. The intrinsic relationship of molecular pathogenesis, as well as common therapeutic strategies for two diseases are still poorly understood. The transcriptome of the COVID-19 and AH has been compared to obtain the altered genes and hub genes were screened out through protein–protein interaction (PPI) network analysis. Via gene ontology (GO), pathway enrichment, and transcription regulator analysis, a deeper appreciation of the interplay mechanism between hub genes were established. Finally, gene-disease and gene–drug analysis were displayed to instruct the clinical treatments. With 181 common differentially expressed genes (DEGs) of AH and COVID-19 were obtained, 10 hub genes were captured. Follow-up studies located that these 10 genes typically mediated the diseases occurrence by regulating the activities of the immune system. Other results suggest that the common pathways of the two ailments are enriched in regulating the function of immune cells and release of immune molecules. The top 10 drug candidates have been chosen primarily, some of which have been proved effective in treating AH sufferers infected with COVID-19. This study reveals the common pathogenesis of COVID-19 and AH and assist to discover necessary therapeutic targets to combat the ongoing pandemic induced via SARS-CoV-2 infection and acquire promising remedy strategies for the two diseases.

Abstract Image

从生物信息学和系统生物学角度探讨新冠肺炎与酒精性肝炎的关系
严重急性呼吸系统综合征冠状病毒2型已被认为是对人类健康的威胁。酒精性肝炎(AH)是一种危及生命的急性和慢性肝衰竭,发生在过度饮酒的患者身上。在疫情期间,AH的重症发病率和死亡率不断上升。分子发病机制的内在关系以及这两种疾病的常见治疗策略仍知之甚少。对新冠肺炎和AH的转录组进行了比较,以获得改变的基因,并通过蛋白质-蛋白质相互作用(PPI)网络分析筛选出枢纽基因。通过基因本体论(GO)、通路富集和转录调节因子分析,对中枢基因之间的相互作用机制建立了更深入的认识。最后,展示了基因疾病和基因药物分析,以指导临床治疗。获得了181个AH和新冠肺炎常见差异表达基因(DEGs),捕获了10个枢纽基因。后续研究发现,这10个基因通常通过调节免疫系统的活性来介导疾病的发生。其他结果表明,这两种疾病的共同途径在调节免疫细胞的功能和免疫分子的释放方面很丰富。主要选择了前10名候选药物,其中一些药物已被证明对治疗感染新冠肺炎的AH患者有效。这项研究揭示了新冠肺炎和AH的常见发病机制,并有助于发现必要的治疗靶点,以对抗由SARS-CoV-2感染引发的持续大流行,并获得这两种疾病的有前景的治疗策略。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
CiteScore
1.00
自引率
0.00%
发文量
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信