Fine optimization of a dissolution dynamic nuclear polarization experimental setting for 13C NMR of metabolic samples.

Q3 Physics and Astronomy
Magnetic resonance (Gottingen, Germany) Pub Date : 2022-09-29 eCollection Date: 2022-01-01 DOI:10.5194/mr-3-183-2022
Arnab Dey, Benoît Charrier, Karine Lemaitre, Victor Ribay, Dmitry Eshchenko, Marc Schnell, Roberto Melzi, Quentin Stern, Samuel F Cousin, James G Kempf, Sami Jannin, Jean-Nicolas Dumez, Patrick Giraudeau
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Abstract

NMR-based analysis of metabolite mixtures provides crucial information on biological systems but mostly relies on 1D 1H experiments for maximizing sensitivity. However, strong peak overlap of 1H spectra often is a limitation for the analysis of inherently complex biological mixtures. Dissolution dynamic nuclear polarization (d-DNP) improves NMR sensitivity by several orders of magnitude, which enables 13C NMR-based analysis of metabolites at natural abundance. We have recently demonstrated the successful introduction of d-DNP into a full untargeted metabolomics workflow applied to the study of plant metabolism. Here we describe the systematic optimization of d-DNP experimental settings for experiments at natural 13C abundance and show how the resolution, sensitivity, and ultimately the number of detectable signals improve as a result. We have systematically optimized the parameters involved (in a semi-automated prototype d-DNP system, from sample preparation to signal detection, aiming at providing an optimization guide for potential users of such a system, who may not be experts in instrumental development). The optimization procedure makes it possible to detect previously inaccessible protonated 13C signals of metabolites at natural abundance with at least 4 times improved line shape and a high repeatability compared to a previously reported d-DNP-enhanced untargeted metabolomic study. This extends the application scope of hyperpolarized 13C NMR at natural abundance and paves the way to a more general use of DNP-hyperpolarized NMR in metabolomics studies.

代谢样品13C NMR溶解动态核极化实验装置的精细优化
摘要基于NMR的代谢物混合物分析提供了生物系统的关键信息,但主要依赖于1D 1H实验来最大限度地提高灵敏度。然而,1H光谱的强峰重叠往往是分析固有复杂生物混合物的一个限制。溶解动态核极化(d-DNP)将NMR灵敏度提高了几个数量级,这使得能够对天然丰度的代谢物进行基于13C NMR的分析。我们最近已经成功地将d-DNP引入了一个完全非靶向的代谢组学工作流程,该工作流程应用于植物代谢研究。在这里,我们描述了在天然13C丰度下进行实验的d-DNP实验设置的系统优化,并展示了分辨率、灵敏度以及最终可检测信号的数量是如何提高的。我们系统地优化了所涉及的参数(在asemi自动化原型d-DNP系统中,从样品制备到信号检测,旨在为该系统的潜在用户提供优化指南,这些用户可能不是仪器开发专家)。与先前报道的d-DNP增强的非靶向代谢组学研究相比,优化程序使检测以前无法获得的天然丰度代谢物的质子化13C信号成为可能,其线形和重复性至少提高了4倍。这扩展了天然丰度超极化13C NMR的应用范围,并为DNP超极化NMRin代谢组学研究的更广泛应用铺平了道路。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
CiteScore
4.50
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0.00%
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审稿时长
14 weeks
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