Fourier transform near infrared spectroscopy as a tool to predict spawning status in Alaskan fishes with variable reproductive strategies

IF 1.6 4区 化学 Q3 CHEMISTRY, APPLIED
T. TenBrink, Sandra K. Neidetcher, Morgan B. Arrington, I. Benson, C. Conrath, T. Helser
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Abstract

Fourier-transform near infrared (FT-NIR) spectroscopy of ovarian tissue was used to predict maturity status of fish species with variable reproductive strategies collected at limited time periods of their spawning cycle. Reference data were derived from histologically prepared tissue samples from four species: Pacific cod (Gadus macrocephalus), walleye pollock (Gadus chalcogrammus), Greenland turbot (Reinhardtius hippoglossoides), and northern rockfish (Sebastes polyspinis). Each data set was classified into reproductively immature (non-spawning) and reproductively mature (spawning-capable) categories. Principal component analysis of spectral data showed separation between ovarian tissues of spawning-capable and non-spawning females. Multivariate classification using partial least squares discriminant analysis indicated good discrimination based on spawning status with high predictive accuracy. Greenland turbot and northern rockfish showed clear distinction between ovaries of spawning-capable and non-spawning females and a model validation with 100% and 96.6% classification accuracy, respectively. Pacific cod and walleye pollock had more complicated reproductive patterns at time of collection and classification rates were still 96.6% and 92.1%. This study demonstrated the potential application of FT-NIR spectroscopy to predict spawning status from ovarian tissue even for species with complicated spawning patterns and for collections outside of the preferred spawning period. Future work may include the use of this technology to classify distinct oocyte development stages.
傅立叶变换近红外光谱作为预测具有可变繁殖策略的阿拉斯加鱼类产卵状况的工具
使用卵巢组织的傅立叶变换近红外光谱(FT-NIR)来预测在产卵周期的有限时间段收集的不同繁殖策略的鱼类的成熟状态。参考数据来源于四个物种的组织学制备的组织样本:太平洋鳕鱼(Gadus macrochalphus)、大眼鳕鱼(Gatus chalcogrammus)、格陵兰大菱鲆(Reinhardtius hippoglossoides)和北方岩鱼(Sebastes polyspinis)。每个数据集被分为繁殖未成熟(非产卵)和繁殖成熟(有产卵能力)两类。光谱数据的主成分分析表明,有产卵能力和无产卵能力的雌性卵巢组织之间存在分离。使用偏最小二乘判别分析的多变量分类表明,基于产卵状态的判别效果良好,预测精度高。格陵兰大菱鲆和北方岩鱼在有产卵能力的雌性和非产卵雌性的卵巢之间表现出明显的区别,模型验证的分类准确率分别为100%和96.6%。太平洋鳕鱼和大眼鳕鱼在采集时具有更复杂的繁殖模式,分类率仍为96.6%和92.1%。本研究证明了FT-NIR光谱在预测卵巢组织产卵状态方面的潜在应用,即使是对于具有复杂产卵模式的物种和首选产卵期以外的采集。未来的工作可能包括使用这项技术对不同的卵母细胞发育阶段进行分类。
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来源期刊
CiteScore
3.30
自引率
5.60%
发文量
35
审稿时长
6 months
期刊介绍: JNIRS — Journal of Near Infrared Spectroscopy is a peer reviewed journal, publishing original research papers, short communications, review articles and letters concerned with near infrared spectroscopy and technology, its application, new instrumentation and the use of chemometric and data handling techniques within NIR.
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