Biodiversity of some fig cultivars in Southern Syria

Q4 Agricultural and Biological Sciences
Sahara Abo Amin, F. Hamed, S. Sarhan, Nashaat Abo Tafish
{"title":"Biodiversity of some fig cultivars in Southern Syria","authors":"Sahara Abo Amin, F. Hamed, S. Sarhan, Nashaat Abo Tafish","doi":"10.25081/jp.2021.v13.7339","DOIUrl":null,"url":null,"abstract":"This research has been conducted in the Biotechnology Laboratory in Damascus University_ Damascus, Syria where the genetic diversity of fourteen cultivars of figs (Ficus carica L.) growing in Swaida governorate which located in the south region of  Syria were investigated using (Simple Sequence Repeats) SSRs technique, where 4 cultivars of them were genotypes scattered in the local fields without any scientific taxonomy and farmers did not classify them properly. Eight pairs of SSRs markers were used depend on their ability to separate between fig cultivars as mentioned in previous studies, six pairs of them gave amplified products in the polymerase chain reaction (PCR), while MFC3 and MFC6 primers did not give any amplification products. A total of 17 alleles were detected at six SSRs loci. The alleles number per locus ranged from 2 to 4 with  an average of 2.83 alleles/locus. The observed heterozygosity (Ho) was 0.33, while the expected heterozygosity (He) was 0.17. The mean value of genetic similarity was 0.69 where fig cultivars has separated into two clusters in Cluster Analysis, which confirms a significant genetic similarity between most of the cultivars. MFC1 and MFC2 loci gave about 0.67 and 0.61 PIC (Polymorphism Information Content) values respectively, which confirms their ability to study the genetic diversity of fig cultivars more than other loci. F1 and F2 cultivars greatly affect the quality of the fruits as paternity traits as Caprifigs. Tammozi cultivar has low values of its genetic similarity with the rest of the cultivars which reflect great difference between it and other cultivars. Generally, the challenges in this study were in characterizing unrecognized fig cultivars in southern Syria to distinguish between them as they were not certified in agriculture ministry in Syria because the lack in studies related to the same topic as these cultivars were not studied before, thus, we managed to make a significant contribution in certifying fig cultivars in Syria using SSR technique.","PeriodicalId":16777,"journal":{"name":"Journal of Phytology","volume":" ","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2021-12-24","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Phytology","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.25081/jp.2021.v13.7339","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"Agricultural and Biological Sciences","Score":null,"Total":0}
引用次数: 0

Abstract

This research has been conducted in the Biotechnology Laboratory in Damascus University_ Damascus, Syria where the genetic diversity of fourteen cultivars of figs (Ficus carica L.) growing in Swaida governorate which located in the south region of  Syria were investigated using (Simple Sequence Repeats) SSRs technique, where 4 cultivars of them were genotypes scattered in the local fields without any scientific taxonomy and farmers did not classify them properly. Eight pairs of SSRs markers were used depend on their ability to separate between fig cultivars as mentioned in previous studies, six pairs of them gave amplified products in the polymerase chain reaction (PCR), while MFC3 and MFC6 primers did not give any amplification products. A total of 17 alleles were detected at six SSRs loci. The alleles number per locus ranged from 2 to 4 with  an average of 2.83 alleles/locus. The observed heterozygosity (Ho) was 0.33, while the expected heterozygosity (He) was 0.17. The mean value of genetic similarity was 0.69 where fig cultivars has separated into two clusters in Cluster Analysis, which confirms a significant genetic similarity between most of the cultivars. MFC1 and MFC2 loci gave about 0.67 and 0.61 PIC (Polymorphism Information Content) values respectively, which confirms their ability to study the genetic diversity of fig cultivars more than other loci. F1 and F2 cultivars greatly affect the quality of the fruits as paternity traits as Caprifigs. Tammozi cultivar has low values of its genetic similarity with the rest of the cultivars which reflect great difference between it and other cultivars. Generally, the challenges in this study were in characterizing unrecognized fig cultivars in southern Syria to distinguish between them as they were not certified in agriculture ministry in Syria because the lack in studies related to the same topic as these cultivars were not studied before, thus, we managed to make a significant contribution in certifying fig cultivars in Syria using SSR technique.
叙利亚南部一些无花果品种的生物多样性
本研究在叙利亚大马士革大学生物技术实验室进行,利用(简单序列重复)SSRs技术对生长在叙利亚南部Swaida省的14个无花果品种的遗传多样性进行了调查,其中4个品种的基因型分散在当地的田间,没有进行科学的分类,农民也没有进行适当的分类。8对SSRs标记根据其在无花果品种间的分离能力使用,其中6对引物在聚合酶链反应(PCR)中得到扩增产物,而MFC3和MFC6引物没有得到扩增产物。在6个SSRs位点共检测到17个等位基因。每个位点的等位基因数为2 ~ 4个,平均为2.83个。观察杂合度(Ho)为0.33,期望杂合度(He)为0.17。聚类分析结果表明,无花果品种间遗传相似性均值为0.69,大部分品种间遗传相似性显著。MFC1和MFC2位点的多态性信息含量(PIC)分别约为0.67和0.61,证实了它们比其他位点更能研究无花果品种的遗传多样性。F1和F2品种作为亲本性状对果实品质影响较大。Tammozi品种与其他品种的遗传相似性值较低,反映了其与其他品种的较大差异。总的来说,本研究的挑战在于鉴定叙利亚南部未被认可的无花果品种,以区分它们,因为它们没有在叙利亚农业部获得认证,因为缺乏与这些品种相同主题的研究,因此,我们设法利用SSR技术在叙利亚无花果品种认证方面做出了重大贡献。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
Journal of Phytology
Journal of Phytology Agricultural and Biological Sciences-Plant Science
CiteScore
1.40
自引率
0.00%
发文量
17
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信