{"title":"Three-dimensional phase field model for actin-based cell membrane dynamics","authors":"M. Hamed, A. Nepomnyashchy","doi":"10.1051/mmnp/2021048","DOIUrl":null,"url":null,"abstract":"The interface dynamics of a 3D cell immersed in a 3D extracellular matrix is investigated. We suggest a 3D generalization of a known 2D minimal phase field model suggested in Ziebert et al. [J. R. Soc. Interface 9 (2012) 1084–1092] for the description of keratocyte motility. Our model consists of two coupled evolution equations for the order parameter and a three-dimensional vector field describing the actin network polarization (orientation). We derive a closed evolutionary integro-differential equation governing the interface dynamics of a 3D cell. The equation includes the normal velocity of the membrane, its curvature, cell volume relaxation, and a parameter that is determined by the non-equilibrium effects in the cytoskeleton. This equation can be considered as a 3D generalization of the 2D case that was studied in Abu Hamed and Nepomnyashchy [Physica D 408 (2020)].","PeriodicalId":18285,"journal":{"name":"Mathematical Modelling of Natural Phenomena","volume":" ","pages":""},"PeriodicalIF":2.6000,"publicationDate":"2021-06-03","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"3","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Mathematical Modelling of Natural Phenomena","FirstCategoryId":"100","ListUrlMain":"https://doi.org/10.1051/mmnp/2021048","RegionNum":4,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"MATHEMATICAL & COMPUTATIONAL BIOLOGY","Score":null,"Total":0}
引用次数: 3
Abstract
The interface dynamics of a 3D cell immersed in a 3D extracellular matrix is investigated. We suggest a 3D generalization of a known 2D minimal phase field model suggested in Ziebert et al. [J. R. Soc. Interface 9 (2012) 1084–1092] for the description of keratocyte motility. Our model consists of two coupled evolution equations for the order parameter and a three-dimensional vector field describing the actin network polarization (orientation). We derive a closed evolutionary integro-differential equation governing the interface dynamics of a 3D cell. The equation includes the normal velocity of the membrane, its curvature, cell volume relaxation, and a parameter that is determined by the non-equilibrium effects in the cytoskeleton. This equation can be considered as a 3D generalization of the 2D case that was studied in Abu Hamed and Nepomnyashchy [Physica D 408 (2020)].
研究了浸泡在三维细胞外基质中的三维细胞的界面动力学。我们建议对Ziebert等人[J.R.Soc.Interface 9(2012)1084-1092]中提出的已知2D最小相场模型进行3D推广,以描述角膜细胞运动。我们的模型由两个阶参数的耦合进化方程和一个描述肌动蛋白网络极化(取向)的三维矢量场组成。我们导出了一个控制三维细胞界面动力学的闭合进化积分微分方程。该方程包括膜的法向速度、曲率、细胞体积弛豫,以及由细胞骨架中的非平衡效应决定的参数。该方程可以被认为是Abu Hamed和Nepomnyashchy[Physica D 408(2020)]中研究的2D情况的3D推广。
期刊介绍:
The Mathematical Modelling of Natural Phenomena (MMNP) is an international research journal, which publishes top-level original and review papers, short communications and proceedings on mathematical modelling in biology, medicine, chemistry, physics, and other areas. The scope of the journal is devoted to mathematical modelling with sufficiently advanced model, and the works studying mainly the existence and stability of stationary points of ODE systems are not considered. The scope of the journal also includes applied mathematics and mathematical analysis in the context of its applications to the real world problems. The journal is essentially functioning on the basis of topical issues representing active areas of research. Each topical issue has its own editorial board. The authors are invited to submit papers to the announced issues or to suggest new issues.
Journal publishes research articles and reviews within the whole field of mathematical modelling, and it will continue to provide information on the latest trends and developments in this ever-expanding subject.